RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SERPINB7O75635 380 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 UPK1BO75841 260 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 SCELO95171 688 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 SMC2O95347 1197 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 TGM6O95932 706 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 CD160O95971 181 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 IFNW1P05000 195 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 PFN1P07737 140 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 KRT16P08779 473 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 P0C880 135 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 CD70P32970 193 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 GGT2P36268 569 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 POLR2IP36954 125 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 MYCNOSP40205 109 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 MAGEA1P43355 309 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 NDUFA8P51970 172 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 OR2B8PP59922 312 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 TRMT5Q32P41 509 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 GCSAMLQ5JQS6 135 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 ORMDL3Q8N138 153 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 SLC25A29Q8N8R3 303 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 PHOSPHO2Q8TCD6 241 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 CPNE4Q96A23 557 aaPredicted RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 ZFP3Q96NJ6 502 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 OR4K3Q96R72 315 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 PDCD1LG2Q9BQ51 273 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 C11orf70Q9BRQ4 267 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 SHANK2-AS3Q9BTD1 123 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 TBL1XR1Q9BZK7 514 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 API5Q9BZZ5 524 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 SLC7A5P2Q9GIP4 190 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 DYRK4Q9NR20 520 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 INIPQ9NRY2 104 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF586Q9NXT0 402 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 PTTG3PQ9NZH4 202 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF230Q9UIE0 474 aaPredicted RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 FARSAQ9Y285 508 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 RCL1Q9Y2P8 373 aaKnown RBP1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 NID2Q14112 1375 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 JCADQ9P266 1359 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 TICRRQ7Z2Z1 1910 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 HIVEP2P31629 2446 aa1.54□□□□□ -2.16
ECHDC1-213ENST00000474240 NPHP4O75161 1426 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 CNMDO75829 334 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 MMP7P09237 267 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 TACSTD2P09758 323 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 GSTM3P21266 225 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 CLDN18P56856 261 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 TAS2R39P59534 338 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 RAD51Q06609 339 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 DNAJC3Q13217 504 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 IHHQ14623 411 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 LUZP6Q538Z0 58 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 FAM104BQ5XKR9 115 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 TMEM53Q6P2H8 277 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 PAGE2Q7Z2X7 111 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 DRAM1Q8N682 238 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 PQLC3Q8N755 202 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF645Q8N7E2 425 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 C8orf31Q8N9H6 132 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 CCDC148Q8NFR7 591 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 ITFG1Q8TB96 612 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 SHROOM3Q8TF72 1996 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 MTG1Q9BT17 334 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 ELOVL6Q9H5J4 265 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 ZNF442Q9H7R0 627 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 PLEKHF2Q9H8W4 249 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 ACP6Q9NPH0 428 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 PARP11Q9NR21 331 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 TAS2R5Q9NYW4 299 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 RAB22AQ9UL26 194 aa1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 MCTS1Q9ULC4 181 aaKnown RBP1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 CAB39Q9Y376 341 aaPredicted RBP1.53□□□□□ -2.16
ECHDC1-213ENST00000474240 SCN4AP35499 1836 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 MROH5Q6ZUA9 1318 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 IGKV1-27A0A075B6S5 117 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 D6RAR5 112 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 BCKDKO14874 412 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 FCN3O75636 299 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 SLC1A2P43004 574 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 GPR1P46091 355 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ZNF33AQ06730 810 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ALKBH6Q3KRA9 238 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 MRPL2Q5T653 305 aaKnown RBP1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 HHATQ5VTY9 493 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 TMEM220Q6QAJ8 160 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 TMEM136Q6ZRR5 245 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 COMMD1Q8N668 190 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 WDR31Q8NA23 367 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 INO80EQ8NBZ0 244 aaPredicted RBP1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 BBOF1Q8ND07 529 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 OR10Z1Q8NGY1 313 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 SMARCD1Q96GM5 515 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 RDH12Q96NR8 316 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ALS2CR12Q96Q35 445 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 PANX1Q96RD7 426 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ANGPTL4Q9BY76 406 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 KRTAP4-1Q9BYQ7 146 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 ABCG5Q9H222 651 aa1.52□□□□□ -2.17
ECHDC1-213ENST00000474240 FANCEQ9HB96 536 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms