RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PEX7O00628 323 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 TOR1AO14656 332 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 RAD51BO15315 384 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 AKR7A2O43488 359 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 AIREO43918 545 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 HSBP1O75506 76 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 PTTG1O95997 202 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 IGLV1-47P01700 117 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 APOA1P02647 267 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 RETP07949 1114 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 TDGF1P13385 188 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 UCHL3P15374 230 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 UGT2B10P36537 528 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 TDGF1P3P51864 188 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 AQP5P55064 265 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 WNT4P56705 351 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 DAOAP59103 153 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 VBP1P61758 197 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 BNIP2Q12982 314 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 YIF1BQ5BJH7 314 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 SOHLH1Q5JUK2 328 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 OR52W1Q6IF63 320 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 FRMPD2BQ6IN97 320 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 LCN12Q6JVE5 192 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 FBXL22Q6P050 247 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 RFLNAQ6ZTI6 216 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 ABHD13Q7L211 337 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 LINC00523Q86TU6 105 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 TGIF2LYQ8IUE0 185 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 INO80EQ8NBZ0 244 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 OR5H6Q8NGV6 325 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 LRRC20Q8TCA0 184 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 LKAAEAR1Q8TD35 194 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 PDCD6IPQ8WUM4 868 aaKnown RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 TOP1MTQ969P6 601 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 DUS3LQ96G46 650 aaKnown RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 BTN2A3PQ96KV6 586 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 GLT1D1Q96MS3 346 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 OR5B12Q96R08 314 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 PARP12Q9H0J9 701 aaKnown RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 PIGUQ9H490 435 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 CLMPQ9H6B4 373 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 EML4Q9HC35 981 aaKnown RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 MMP26Q9NRE1 261 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 MYEF2Q9P2K5 600 aaKnown RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF282Q9UDV7 671 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 ZNF629Q9UEG4 869 aaPredicted RBP3.03□□□□□ -1.92
BRCA1-212ENST00000473961 LRP6O75581 1613 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 CHD4Q14839 1912 aa3.03□□□□□ -1.92
BRCA1-212ENST00000473961 A2ML1A8K2U0 1454 aa3.03□□□□□ -1.93
BRCA1-212ENST00000473961 DCCP43146 1447 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CHD1O14646 1710 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 C3P01024 1663 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 MYH3P11055 1940 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 TRAV6A0A075B6T7 132 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 A0A1B0GVI7 797 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 LINC00862A6NCI5 91 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 FAM231BA6NCW3 169 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF726A6NNF4 738 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 PDZK1P1A8MUH7 402 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 SCAMP2O15127 329 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ICOSLGO75144 302 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 NPIPB7O75200 414 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 UGT2B11O75310 529 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CLDN11O75508 207 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 UPK1BO75841 260 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CIAO1O76071 339 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 RAB3DO95716 219 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 LSM8O95777 96 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 AIFM1O95831 613 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CALB1P05937 261 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ZDHHC11BP0C7U3 371 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 IGHV3-43DP0DP04 118 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 COX4I1P13073 169 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CRISP2P16562 243 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF3P17036 446 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 BGNP21810 368 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ME2P23368 584 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 F8A1P23610 371 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ERP29P30040 261 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 NUP62P37198 522 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 HTR2BP41595 481 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ERFP50548 548 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 CAV2P51636 162 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 NKX2-5P52952 324 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 AP1S2P56377 157 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 DEFA1P59665 94 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 DEFA3P59666 94 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 NUTF2P61970 127 aaKnown RBP3.02□□□□□ -1.93
BRCA1-212ENST00000473961 IFITM3Q01628 133 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 SP4Q02446 784 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 FLOT2Q14254 428 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 HERPUD1Q15011 391 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 SGCAQ16586 387 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 Q3ZCU0 254 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 HIKESHIQ53FT3 197 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 BRMS1LQ5PSV4 323 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ANKRD22Q5VYY1 191 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 ZNF773Q6PK81 442 aa3.02□□□□□ -1.93
BRCA1-212ENST00000473961 THOC6Q86W42 341 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms