RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PGAP1Q75T13 922 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 RNF113BQ8IZP6 322 aaKnown RBP7.84□□□□□ -1.15
MCF2L-223ENST00000473345 KLHDC1Q8N7A1 406 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 GJC3Q8NFK1 279 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 OR5T2Q8NGG2 359 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 OR56B2PQ8NGI1 322 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 PIFOQ8TCI5 191 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 ERGIC1Q969X5 290 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 PHF21AQ96BD5 680 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 RSRC1Q96IZ7 334 aaKnown RBP7.84□□□□□ -1.15
MCF2L-223ENST00000473345 HSH2DQ96JZ2 352 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 DDOQ99489 341 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 PITX2Q99697 317 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 HCAR1Q9BXC0 346 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 NDEL1Q9GZM8 345 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 MMP28Q9H239 520 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 MAGIXQ9H6Y5 334 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 FN3KRPQ9HA64 309 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 ELL3Q9HB65 397 aaPredicted RBP7.84□□□□□ -1.15
MCF2L-223ENST00000473345 ZNF319Q9P2F9 582 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 ONECUT1Q9UBC0 465 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 POLR1DQ9Y2S0 133 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 AP4S1Q9Y587 144 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 KPTNQ9Y664 436 aa7.84□□□□□ -1.15
MCF2L-223ENST00000473345 SERPINA1P01009 418 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 IFNW1P05000 195 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 CD28P10747 220 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 OTX1P32242 354 aaPredicted RBP7.83□□□□□ -1.16
MCF2L-223ENST00000473345 PYCR1P32322 319 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 TGFBR2P37173 567 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 TGM4P49221 684 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 LOXL3P58215 753 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 ERVFRD-1P60508 538 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 SLC34A1Q06495 639 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 RFX4Q33E94 735 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 KLHL12Q53G59 568 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 GPR139Q6DWJ6 353 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 WDR82Q6UXN9 313 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 Q6ZS46 218 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 ZBTB46Q86UZ6 589 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 LNX2Q8N448 690 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 OR4K13Q8NH42 304 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 WIPF2Q8TF74 440 aaPredicted RBP7.83□□□□□ -1.16
MCF2L-223ENST00000473345 SPRYD4Q8WW59 207 aaPredicted RBP7.83□□□□□ -1.16
MCF2L-223ENST00000473345 FAM162AQ96A26 154 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 PYURFQ96I23 114 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 ATF6BQ99941 703 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 WDR13Q9H1Z4 485 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 DPAGT1Q9H3H5 408 aa7.83□□□□□ -1.16
MCF2L-223ENST00000473345 RPRD1BQ9NQG5 326 aaKnown RBP7.83□□□□□ -1.16
MCF2L-223ENST00000473345 SAMD4AQ9UPU9 718 aaKnown RBP7.83□□□□□ -1.16
MCF2L-223ENST00000473345 TRAV38-1A0A0B4J264 116 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 A0A1B0GVI7 797 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 TVP23AA6NH52 213 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 A6NLC8 198 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 H3BUX3 64 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 K7EIL1 84 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 M0R135 149 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 ZNF682O95780 498 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 FBP1P09467 338 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 RAP2AP10114 183 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 GABRA5P31644 462 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 IKZF1Q13422 519 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 SNCBQ16143 134 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 DGUOKQ16854 277 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 FAM98BQ52LJ0 330 aaKnown RBP7.82□□□□□ -1.16
MCF2L-223ENST00000473345 LDLRAD2Q5SZI1 272 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 STUMQ69YW2 141 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 DPY19L2P2Q6ZN68 376 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 MRPL21Q7Z2W9 205 aaKnown RBP7.82□□□□□ -1.16
MCF2L-223ENST00000473345 ADCK1Q86TW2 530 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 DYNAPQ8N1N2 210 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 PQLC1Q8N2U9 271 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 SDR9C7Q8NEX9 313 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 C8orf46Q8TAG6 207 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 LRRC29Q8WV35 223 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 LZICQ8WZA0 190 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 ZNF799Q96GE5 643 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 C7orf34Q96L11 122 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 ERMAPQ96PL5 475 aaPredicted RBP7.82□□□□□ -1.16
MCF2L-223ENST00000473345 DCTN5Q9BTE1 182 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 TRIM36Q9NQ86 728 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 SNTG1Q9NSN8 517 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 SERTAD4Q9NUC0 356 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 NDUFAF4Q9P032 175 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 FAM96BQ9Y3D0 163 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 ENPP4Q9Y6X5 453 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
MCF2L-223ENST00000473345 hCG_1807616A0A1W2PRN6 198 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 MEIOCA2RUB1 952 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 UNC119BA6NIH7 251 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 GMDSO60547 372 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 KIR2DS4P43632 304 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 KRTAP10-11P60412 298 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 GMFBP60983 142 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 NSUN5P1Q3KNT7 163 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 IFI44LQ53G44 452 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 FOXB2Q5VYV0 432 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 FKBP9P1Q75LS8 142 aa7.81□□□□□ -1.16
MCF2L-223ENST00000473345 LINC00471Q8N535 108 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms