RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SLC34A3Q8N130 599 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 LYG1Q8N1E2 194 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 LINC01555Q8NAE3 123 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 SUN5Q8TC36 379 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 BMFQ96LC9 184 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 CATSPER2Q96P56 530 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 SULT4A1Q9BR01 284 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 TMEM243Q9BU79 118 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 UPF3BQ9BZI7 483 aaKnown RBP4.48□□□□□ -1.69
SMC5-202ENST00000471372 RHBDL2Q9NX52 303 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 URGCP-MRPS24S4R325 110 aa4.48□□□□□ -1.69
SMC5-202ENST00000471372 ZNF318Q5VUA4 2279 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 IGKV1-27A0A075B6S5 117 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 A0A1B0GUA9 196 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 CBR3O75828 277 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 UPK1BO75841 260 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 TPM3P06753 285 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 GP1BAP07359 652 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 TLX1NBP0CAT3 122 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 RD3LP0DJH9 198 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 TEAD1P28347 426 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 TALDO1P37837 337 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 MAGEA3P43357 314 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 PPOXP50336 477 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 ARG2P78540 354 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 ZBTB6Q15916 424 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 SNRNP35Q16560 246 aaKnown RBP4.47□□□□□ -1.69
SMC5-202ENST00000471372 HSP90B2PQ58FF3 399 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 RESP18Q5W5W9 173 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 RTL4Q6ZR62 310 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 TMEM25Q86YD3 366 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 ZNF584Q8IVC4 421 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 NELFCDQ8IXH7 590 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 LRRC52Q8N7C0 313 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 Q8N976 141 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 C19orf18Q8NEA5 215 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 OR7G1Q8NGA0 311 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 PDCD1LG2Q9BQ51 273 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 COA1Q9GZY4 146 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 RAB23Q9ULC3 237 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 NDRG2Q9UN36 371 aaKnown RBP4.47□□□□□ -1.69
SMC5-202ENST00000471372 NEU3Q9UQ49 428 aa4.47□□□□□ -1.69
SMC5-202ENST00000471372 BRCA1P38398 1863 aaKnown RBP4.46□□□□□ -1.7
SMC5-202ENST00000471372 TRAV8-4A0A0B4J246 113 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 IGHV5-51A0A0C4DH38 117 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 SLC5A10A0PJK1 596 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 ZNF593O00488 134 aaPredicted RBP4.46□□□□□ -1.7
SMC5-202ENST00000471372 RAD51BO15315 384 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 SGCEO43556 437 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 RCBTB2O95199 551 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 P01737 135 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 CRATP43155 626 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 GFERP55789 205 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 MTPNP58546 118 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 IRF4Q15306 451 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 TMEM236Q5W0B7 351 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 THOC7Q6I9Y2 204 aaKnown RBP4.46□□□□□ -1.7
SMC5-202ENST00000471372 ZNF530Q6P9A1 599 aaPredicted RBP4.46□□□□□ -1.7
SMC5-202ENST00000471372 PCP2Q8IVA1 136 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 SLC7A5P1Q8MH63 180 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 OR10G6Q8NH81 332 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 RXFP4Q8TDU9 374 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 DOK4Q8TEW6 326 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 OR5P2Q8WZ92 322 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 RERGQ96A58 199 aaPredicted RBP4.46□□□□□ -1.7
SMC5-202ENST00000471372 PTX4Q96A99 478 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 Q96MT0 163 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 HSD17B10Q99714 261 aaKnown RBP4.46□□□□□ -1.7
SMC5-202ENST00000471372 IFT46Q9NQC8 304 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 SIGLEC7Q9Y286 467 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 AP3M1Q9Y2T2 418 aa4.46□□□□□ -1.7
SMC5-202ENST00000471372 A0A1B0GVX0 72 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 MKRN2OSH3BPM6 223 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 J3QT63 122 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 M0QXV9 152 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 TOR1AO14656 332 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 TNFAIP8O95379 198 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 CD8AP01732 235 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 GIMD1P0DJR0 217 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 CXCR1P25024 350 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 PAX6P26367 422 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 RAP1AP62834 184 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 IL5RAQ01344 420 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 INCA1Q0VD86 236 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 C5orf47Q569G3 176 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 ZFAND1Q8TCF1 268 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 ZNF488Q96MN9 340 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 ZNF396Q96N95 335 aaPredicted RBP4.45□□□□□ -1.7
SMC5-202ENST00000471372 SLC25A39Q9BZJ4 359 aaPredicted RBP4.45□□□□□ -1.7
SMC5-202ENST00000471372 PORCNQ9H237 461 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 PDFQ9HBH1 243 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 RBAKQ9NYW8 714 aaPredicted RBP4.45□□□□□ -1.7
SMC5-202ENST00000471372 HES2Q9Y543 173 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 FADS3Q9Y5Q0 445 aa4.45□□□□□ -1.7
SMC5-202ENST00000471372 CARMIL3Q8ND23 1372 aa4.44□□□□□ -1.7
SMC5-202ENST00000471372 NDUFC2-KCTD14E9PQ53 114 aa4.44□□□□□ -1.7
SMC5-202ENST00000471372 PLPP3O14495 311 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms