RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 DAZAP2Q15038 168 aaPredicted RBP7□□□□□ -1.29
NPHP3-204ENST00000469232 MSMPQ1L6U9 139 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 CNPY1Q3B7I2 92 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 HSD17B12Q53GQ0 312 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 LINC00299Q6ZSB3 139 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 PGAP1Q75T13 922 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 SERPINA12Q8IW75 414 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 DMRTC2Q8IXT2 367 aaPredicted RBP7□□□□□ -1.29
NPHP3-204ENST00000469232 OR5AS1Q8N127 324 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 CSNK2A3Q8NEV1 391 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 OR2AE1Q8NHA4 323 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 NDNFQ8TB73 568 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 FAM222BQ8WU58 562 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 SLC25A46Q96AG3 418 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 FGGYQ96C11 551 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 RADILQ96JH8 1075 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 C1QTNF6Q9BXI9 259 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 SLIRPQ9GZT3 109 aaKnown RBP7□□□□□ -1.29
NPHP3-204ENST00000469232 DCSTAMPQ9H295 470 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 PTTG2Q9NZH5 202 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 PMF1-BGLAPU3KQ54 211 aa7□□□□□ -1.29
NPHP3-204ENST00000469232 A0A075B6Q4 140 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 IGKV1-9A0A0C4DH69 117 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 A0A1W2PPW3 197 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 FAM221AA4D161 298 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SHISA9B4DS77 424 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 M0R1B8 84 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 TBX1O43435 398 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 NOL3O60936 208 aaKnown RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 IGHV3-13P01766 116 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 RNF224P0DH78 156 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SELEP16581 610 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 HOXB4P17483 251 aaPredicted RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 CALRP27797 417 aaKnown RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SDC2P34741 201 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SOX2P48431 317 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 EVX1P49640 407 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 PSG7Q13046 419 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 BEX5Q5H9J7 111 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 C1orf100Q5SVJ3 147 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 ADAM5Q6NVV9 412 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 DNAAF1Q8NEP3 725 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SEMA6DQ8NFY4 1073 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 OR5D14Q8NGL3 314 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 OR13C3Q8NGS6 347 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SLC25A40Q8TBP6 338 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 KLF14Q8TD94 323 aaPredicted RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 FAM71F1Q96KD3 344 aaPredicted RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 TECTBQ96PL2 329 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 BARHL1Q9BZE3 327 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 EXOSC4Q9NPD3 245 aaKnown RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 MRPL15Q9P015 296 aaKnown RBP6.99□□□□□ -1.29
NPHP3-204ENST00000469232 GTF2A1LQ9UNN4 478 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 SPEF1Q9Y4P9 236 aa6.99□□□□□ -1.29
NPHP3-204ENST00000469232 PLCE1Q9P212 2302 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ZNF816-ZNF321PA0A0X1KG74 233 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 TUBAL3A6NHL2 446 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 CDRT1O95170 752 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 PTBP3O95758 552 aaKnown RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 PLA2G2AP14555 144 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 CCNOP22674 350 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 THBS2P35442 1172 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ALDH3B1P43353 468 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 PSMD7P51665 324 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 RPS23P62266 143 aaKnown RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 LSM3P62310 102 aaKnown RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 BSPH1Q075Z2 132 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 UBE2V2Q15819 145 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ODF4Q2M2E3 257 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 FAM76BQ5HYJ3 339 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 CLVS2Q5SYC1 327 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 WFDC8Q8IUA0 241 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 CROCCP3Q8IVE0 287 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 NKAIN3Q8N8D7 197 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 OR1M1Q8NGA1 313 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 OR56B2PQ8NGI1 322 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 OR1J1Q8NGS3 322 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 LINC01560Q8TB33 94 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 TSEN15Q8WW01 171 aaKnown RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 SPSB1Q96BD6 273 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 SPOCK3Q9BQ16 436 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 OR2J1Q9GZK6 312 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ESRP2Q9H6T0 727 aaKnown RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ABCB9Q9NP78 766 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 TMEM138Q9NPI0 162 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 PTTG3PQ9NZH4 202 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 PLEKHB1Q9UF11 243 aaPredicted RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ATP6V1G2-DDX39BF2Z307 99 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 C19orf84I3L1E1 186 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 PDCD5O14737 125 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 SULT1B1O43704 296 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 GMDSO60547 372 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ADH4P08319 380 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 CLEC2LP0C7M8 214 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 FAHP16930 419 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ZNF182P17025 639 aaPredicted RBP6.98□□□□□ -1.29
NPHP3-204ENST00000469232 ATF1P18846 271 aa6.98□□□□□ -1.29
NPHP3-204ENST00000469232 MYL9P24844 172 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms