RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CST11Q9H112 138 aa13□□□□□ -0.33
SF1-211ENST00000448404 LPAR5Q9H1C0 372 aa13□□□□□ -0.33
SF1-211ENST00000448404 FANCFQ9NPI8 374 aa13□□□□□ -0.33
SF1-211ENST00000448404 P4HTMQ9NXG6 502 aa13□□□□□ -0.33
SF1-211ENST00000448404 NXT1Q9UKK6 140 aaKnown RBP13□□□□□ -0.33
SF1-211ENST00000448404 MAB21L2Q9Y586 359 aa13□□□□□ -0.33
SF1-211ENST00000448404 KCNMB2Q9Y691 235 aa13□□□□□ -0.33
SF1-211ENST00000448404 RP1L1Q8IWN7 2480 aaPredicted RBP12.99□□□□□ -0.33
SF1-211ENST00000448404 PLSCR5A0PG75 271 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 UBE2QL1A1L167 161 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 VAMP1P23763 118 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 DSCR4P56555 118 aaPredicted RBP12.99□□□□□ -0.33
SF1-211ENST00000448404 CHAF1BQ13112 559 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 EXT1Q16394 746 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 CLVS2Q5SYC1 327 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 ATP1A1-AS1Q5TC04 95 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 CDCP2Q5VXM1 449 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 SHEQ5VZ18 495 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 CRIP3Q6Q6R5 217 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 C20orf196Q8IYI0 205 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 TMEM123Q8N131 208 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 DMRTA2Q96SC8 542 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 MEGF11A6BM72 1044 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 L7N2F9 121 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 HTR3BO95264 441 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 ITGB2P05107 769 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 MSR1P21757 451 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 NUP62P37198 522 aaPredicted RBP12.99□□□□□ -0.33
SF1-211ENST00000448404 RGS19P49795 217 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 ACTBP60709 375 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 ACTG1P63261 375 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 DHRS2Q13268 280 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 ACER2Q5QJU3 275 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 LY6G6FQ5SQ64 297 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 DCAF12Q5T6F0 453 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 LINC00696Q6ZRV3 163 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 KCTD9Q7L273 389 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 LINC00518Q8N0U6 118 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 LILRB1Q8NHL6 650 aaPredicted RBP12.99□□□□□ -0.33
SF1-211ENST00000448404 HDHD3Q9BSH5 251 aaPredicted RBP12.99□□□□□ -0.33
SF1-211ENST00000448404 SDHAF2Q9NX18 166 aa12.99□□□□□ -0.33
SF1-211ENST00000448404 LRRC3CA6NJW4 275 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 DHHO43323 396 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 HLA-AP01891 365 aaKnown RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 ACKR3P25106 362 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 FOXG1P55316 489 aaPredicted RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 B3GALT5-AS1P59052 145 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 PPP1R1AQ13522 171 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 ZNF273Q14593 569 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 SLC25A43Q8WUT9 341 aaPredicted RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 ST6GALNAC5Q9BVH7 336 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 SH2D2AQ9NP31 389 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 IFT46Q9NQC8 304 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 GPR173Q9NS66 373 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 TAS2R8Q9NYW2 309 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 RAB22AQ9UL26 194 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 PLEKHA6Q9Y2H5 1048 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 OR14I1A6ND48 311 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 METTL21EPA6NDL7 271 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 C9orf172C9J069 976 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 CCL2P13500 99 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 NFYAP23511 347 aaPredicted RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 CFPP27918 469 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 RNASE10Q5GAN6 216 aaKnown RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 OR14K1Q8NGZ2 314 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 MARCH1Q8TCQ1 289 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 DYRK2Q92630 601 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 THOC3Q96J01 351 aaKnown RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 SIGLEC12Q96PQ1 595 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 ARL6Q9H0F7 186 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 PIGLQ9Y2B2 252 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 NOP16Q9Y3C1 178 aaKnown RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 SMG1Q96Q15 3661 aaKnown RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 hCG_1807616A0A1W2PRN6 198 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 FAM166BA8MTA8 275 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 MCRIP1C9JLW8 97 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 F5H5P2 479 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 SPRY1O43609 319 aaPredicted RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 P04436 131 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 IL5P05113 134 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 JMJD7P0C870 316 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 GDF1P27539 372 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 GUCA1AP43080 201 aaPredicted RBP12.98□□□□□ -0.33
SF1-211ENST00000448404 NPY4RP50391 375 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 SIGLEC14Q08ET2 396 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 IKZF1Q13422 519 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 NKAIN3Q8N8D7 197 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 STEAP2Q8NFT2 490 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 OR10R2Q8NGX6 335 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 M1APQ8TC57 530 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 ATPIF1Q9UII2 106 aa12.98□□□□□ -0.33
SF1-211ENST00000448404 SIGLEC5O15389 551 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 NDUFA2O43678 99 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 CDC14BO60729 498 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 PMS2P2O95744 297 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 GIPP09681 153 aaPredicted RBP12.97□□□□□ -0.33
SF1-211ENST00000448404 FCGR2AP12318 317 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 CPN1P15169 458 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 PPP3CBP16298 524 aa12.97□□□□□ -0.33
SF1-211ENST00000448404 DUSP3P51452 185 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms