RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 TNK1Q13470 666 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 OR8G1Q15617 311 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 PCGF3Q3KNV8 242 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 Q499Y3 187 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 CLVS2Q5SYC1 327 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 PHC2Q8IXK0 858 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 SPERTQ8NA61 448 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 OR8S1Q8NH09 359 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 PP6455Q8WZ26 134 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 HIST1H2AAQ96QV6 131 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 VRK1Q99986 396 aaPredicted RBP11.24□□□□□ -0.61
TIMP1-204ENST00000445623 ADAT1Q9BUB4 502 aaKnown RBP11.24□□□□□ -0.61
TIMP1-204ENST00000445623 TMED9Q9BVK6 235 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 CACNG6Q9BXT2 260 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 RAB1BQ9H0U4 201 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
TIMP1-204ENST00000445623 NKIRAS2Q9NYR9 191 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 SCOCQ9UIL1 159 aa11.24□□□□□ -0.61
TIMP1-204ENST00000445623 ANKRD61A6NGH8 418 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 ZSCAN5BA6NJL1 495 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 H7C417 338 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 SPRY3O43610 288 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 HLA-DPB1P04440 258 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 ADH4P08319 380 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 NAT2P11245 290 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 JUNBP17275 347 aaPredicted RBP11.23□□□□□ -0.61
TIMP1-204ENST00000445623 CA6P23280 308 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 DNASE1P24855 282 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 DOC2BQ14184 412 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 TMEM255AQ5JRV8 349 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 FAM209AQ5JX71 171 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 KRT74Q7RTS7 529 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 SERPINA12Q8IW75 414 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 ZDHHC23Q8IYP9 409 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 OR2Z1Q8NG97 314 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 OR51A4Q8NGJ6 313 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 OR10AC1Q8NH08 325 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 PIGCQ92535 297 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 RGP1Q92546 391 aaPredicted RBP11.23□□□□□ -0.61
TIMP1-204ENST00000445623 TMEM106AQ96A25 262 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 FGGYQ96C11 551 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 ELMOD3Q96FG2 381 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 TRMT61AQ96FX7 289 aaKnown RBP11.23□□□□□ -0.61
TIMP1-204ENST00000445623 TECTBQ96PL2 329 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 CHST5Q9GZS9 411 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 EGLN1Q9GZT9 426 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 NDUFB11Q9NX14 153 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 CKLFQ9UBR5 152 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 RHBDD3Q9Y3P4 386 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 ARFGEF3Q5TH69 2177 aa11.23□□□□□ -0.61
TIMP1-204ENST00000445623 TRBV5-5A0A0J9YX44 114 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 A0A1B0GWJ7 208 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 ZNF850A8MQ14 1090 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 ZNF879B4DU55 563 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 TPD52L2O43399 206 aaKnown RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 LILRA1O75019 489 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 RGS9O75916 674 aaPredicted RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 NRASP01111 189 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 OCMP0CE72 109 aaPredicted RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 SOX2P48431 317 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 SRP9P49458 86 aaKnown RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 GP2P55259 537 aaKnown RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 KRTAP10-9P60411 292 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 PRDX4Q13162 271 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 CNN3Q15417 329 aaKnown RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 PLCXD3Q63HM9 321 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 Q6ZR03 302 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 HRNRQ86YZ3 2850 aaPredicted RBP11.22□□□□□ -0.61
TIMP1-204ENST00000445623 PARP16Q8N5Y8 322 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 OR5D14Q8NGL3 314 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 NINJ1Q92982 152 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 MICU1Q9BPX6 476 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 RTL8AQ9BWD3 113 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 TPK1Q9H3S4 243 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 DECR2Q9NUI1 292 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 C14orf119Q9NWQ9 140 aa11.22□□□□□ -0.61
TIMP1-204ENST00000445623 OVOL3O00110 214 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 IGHV1-46P01743 117 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 CD55P08174 381 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 TNFRSF1AP19438 455 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 GALP22466 123 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 CDKN1AP38936 164 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 RPS11P62280 158 aaKnown RBP eCLIP11.21□□□□□ -0.61
TIMP1-204ENST00000445623 RPS25P62851 125 aaKnown RBP11.21□□□□□ -0.61
TIMP1-204ENST00000445623 PPP3R1P63098 170 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 TNFAIP6P98066 277 aaPredicted RBP11.21□□□□□ -0.61
TIMP1-204ENST00000445623 TESK1Q15569 626 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 SSX1Q16384 188 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 CEACAM21Q3KPI0 293 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 ACSM3Q53FZ2 586 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 TMEM42Q69YG0 159 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 MOB3CQ70IA8 216 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 UTS2BQ765I0 119 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 CELF2-AS1Q8N7Q2 184 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 OR10AD1Q8NGE0 317 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 OR13C5Q8NGS8 318 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 UBASH3BQ8TF42 649 aa11.21□□□□□ -0.61
TIMP1-204ENST00000445623 NEU4Q8WWR8 484 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms