RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MFSD11O43934 449 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 ESDP10768 282 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 FOXL1Q12952 345 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 NRF1Q16656 503 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 LRRC26Q2I0M4 334 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 TMEM268Q5VZI3 342 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 PPTC7Q8NI37 304 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 RCN3Q96D15 328 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 C20orf85Q9H1P6 137 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 DPAGT1Q9H3H5 408 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 SRMSQ9H3Y6 488 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 RNF122Q9H9V4 155 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 SIGLEC9Q9Y336 463 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 ETV7Q9Y603 341 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 U3KQ87 197 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 NKX2-6A6NCS4 301 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 FOXH1O75593 365 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 MMP23AO75900 390 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 MGMTP16455 207 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 PIGAP37287 484 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 CD96P40200 585 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
SYNE2-206ENST00000441438 UNC50Q53HI1 259 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 MARCH9Q86YJ5 346 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 SLC30A8Q8IWU4 369 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 UBALD2Q8IYN6 164 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 GALNT16Q8N428 558 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF611Q8N823 705 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 UBAC2Q8NBM4 344 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 OR52B6Q8NGF0 335 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 MYLPFQ96A32 169 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 HSFY1Q96LI6 401 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 UHRF2Q96PU4 802 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 C20orf144Q9BQM9 153 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 MRPL45Q9BRJ2 306 aaKnown RBP9.23□□□□□ -0.93
SYNE2-206ENST00000441438 GKN1Q9NS71 199 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 FTSJ1Q9UET6 329 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 ST6GALNAC2Q9UJ37 374 aa9.23□□□□□ -0.93
SYNE2-206ENST00000441438 TMEM72A0PK05 275 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 AP4M1O00189 453 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 B4GALT3O60512 393 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 CDS2O95674 445 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 IFNA7P01567 189 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 FGF7P21781 194 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 IGFBP6P24592 240 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-206ENST00000441438 PGGT1BP53609 377 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 CLDN20P56880 219 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 NTHL1P78549 312 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 IFITM3Q01628 133 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 ROM1Q03395 351 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 PRR27Q6MZM9 219 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 DEFB128Q7Z7B8 93 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 SPNS2Q8IVW8 549 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 OR52E4Q8NGH9 312 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 RDH11Q8TC12 318 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 C11orf54Q9H0W9 315 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-206ENST00000441438 A0A087WUJ7 227 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 TRBV9A0A0B4J1U6 114 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 G3V2L1 256 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 H0YL77 283 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 NGFRP08138 427 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF133P52736 654 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-206ENST00000441438 MRPS10P82664 201 aaKnown RBP9.22□□□□□ -0.93
SYNE2-206ENST00000441438 CDK6Q00534 326 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 TAL2Q16559 108 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 CLEC14AQ86T13 490 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 RNF157Q96PX1 679 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 TUBB1Q9H4B7 451 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 ZBTB20Q9HC78 741 aaPredicted RBP9.22□□□□□ -0.93
SYNE2-206ENST00000441438 ENY2Q9NPA8 101 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 FCF1Q9Y324 198 aaKnown RBP9.22□□□□□ -0.93
SYNE2-206ENST00000441438 TMED7Q9Y3B3 224 aa9.22□□□□□ -0.93
SYNE2-206ENST00000441438 MANBAO00462 879 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 UBBP0CG47 229 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 ADH5P11766 374 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 CD79AP11912 226 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 BRS3P32247 399 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 GZMKP49863 264 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 PIGPP57054 158 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 CDH18Q13634 790 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 TMEM132DQ14C87 1099 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 SLC25A47Q6Q0C1 308 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 CD164L2Q6UWJ8 174 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 ZNF517Q6ZMY9 492 aaPredicted RBP9.21□□□□□ -0.93
SYNE2-206ENST00000441438 HSD17B13Q7Z5P4 300 aaPredicted RBP9.21□□□□□ -0.93
SYNE2-206ENST00000441438 TP53INP2Q8IXH6 220 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 LRRC25Q8N386 305 aaPredicted RBP9.21□□□□□ -0.93
SYNE2-206ENST00000441438 SLC30A7Q8NEW0 376 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 BEST4Q8NFU0 473 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 TSTD1Q8NFU3 115 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 OR4D11Q8NGI4 311 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 OR6T1Q8NGN1 323 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 OR5M9Q8NGP3 310 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 OR6K2Q8NGY2 324 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 OR8D1Q8WZ84 308 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 TAAR8Q969N4 342 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 ROPN1LQ96C74 230 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 P2RY11Q96G91 374 aa9.21□□□□□ -0.93
SYNE2-206ENST00000441438 MARVELD1Q9BSK0 173 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms