RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 HMGB1P1B2RPK0 211 aaPredicted RBP9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 BIRC5O15392 142 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GMDSO60547 372 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 MT-ND1P03886 318 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 AMY2AP04746 511 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LPLP06858 475 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 FRMD6-AS1P0C7T7 363 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 CTLA4P16410 223 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 NDUFB7P17568 137 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GNALP38405 381 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 MYCNOSP40205 109 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LGALS4P56470 323 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RAB25P57735 213 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ALG10Q5BKT4 473 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 C6orf10Q5SRN2 563 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GCNT6Q5T4J0 391 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ATPAF1Q5TC12 328 aaPredicted RBP9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 STUMQ69YW2 141 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ARMC8Q8IUR7 673 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 NKAIN4Q8IVV8 208 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 C11orf42Q8N5U0 333 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 TMEM255BQ8WV15 326 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SGTBQ96EQ0 304 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 MPP4Q96JB8 637 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GAFA1Q96PS6 74 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ZBTB18Q99592 522 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 PAIP1Q9H074 479 aaKnown RBP9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SLC25A10Q9UBX3 287 aaPredicted RBP9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ZNF256Q9Y2P7 627 aaPredicted RBP9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 KMT2AQ03164 3969 aa9.75□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RHBDL1O75783 438 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 IL6P05231 212 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HOXB9P17482 250 aaPredicted RBP9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 VEGFCP49767 419 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SLC18A1P54219 525 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 CTXN1P60606 82 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RPL23AP62750 156 aaKnown RBP9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 CSNK2BP67870 215 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 FADDQ13158 208 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SSX2Q16385 188 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 OGFOD2Q6N063 350 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 PGAP1Q75T13 922 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 OR2W3Q7Z3T1 314 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 FAM185AQ8N0U4 392 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LRRC75AQ8NAA5 344 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 FNDC8Q8TC99 324 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ITCHQ96J02 903 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RMND5AQ9H871 391 aa9.74□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GSC2O15499 205 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LY86O95711 162 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ACSM4P0C7M7 580 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 FSTP19883 344 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ABCE1P61221 599 aaKnown RBP9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 STX3Q13277 289 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SCARB2Q14108 478 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 C9orf66Q5T8R8 295 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 CORO6Q6QEF8 472 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 WDR82Q6UXN9 313 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ZNF329Q86UD4 541 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GATAD1Q8WUU5 269 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LIPHQ8WWY8 451 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 COQ7Q99807 217 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SLC22A4Q9H015 551 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 WDR13Q9H1Z4 485 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HEXA-AS1Q9H8Q6 139 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RNPEPL1Q9HAU8 725 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SLC25A37Q9NYZ2 338 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ATPIF1Q9UII2 106 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RPS6KA6Q9UK32 745 aa9.73□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 NUDT19A8MXV4 375 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 F5H5K5 113 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 IMPA2O14732 288 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SERPINB7O75635 380 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GLCEO94923 617 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LCATP04180 440 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SLC1A6P48664 564 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HIST1H3AP68431 136 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 KRTAP27-1Q3LI81 207 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ABCA11PQ4W5N1 156 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HSP90B2PQ58FF3 399 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HIST2H3PS2Q5TEC6 136 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SLC2A7Q6PXP3 512 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ZNF788Q6ZQV5 615 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HIST2H3AQ71DI3 136 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 MRPL21Q7Z2W9 205 aaKnown RBP9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 MSRB3Q8IXL7 192 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 LNX2Q8N448 690 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 GTF2H4Q92759 462 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 C12orf43Q96C57 262 aaKnown RBP9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 RAX2Q96IS3 184 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 TM2D3Q9BRN9 247 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 C19orf12Q9NSK7 152 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 HAO2Q9NYQ3 351 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 COA3Q9Y2R0 106 aaPredicted RBP9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 X6R8D5 127 aa9.72□□□□□ -0.85
SMAD9-IT1-201ENST00000437983 SDHDO14521 159 aa9.71□□□□□ -0.86
SMAD9-IT1-201ENST00000437983 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
SMAD9-IT1-201ENST00000437983 MYF6P23409 242 aa9.71□□□□□ -0.86
SMAD9-IT1-201ENST00000437983 CAV3P56539 151 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms