RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PON3Q15166 354 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 THEM4Q5T1C6 240 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 LIN9Q5TKA1 542 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ANKRD26P1Q6NSI1 321 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 SASS6Q6UVJ0 657 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 CLEC18BQ6UXF7 455 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF836Q6ZNA1 936 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 TEX43Q6ZNM6 134 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF493Q6ZR52 646 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 Q6ZSR3 168 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 LINC00173Q6ZV60 143 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 NIPA1Q7RTP0 329 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 FBXL13Q8NEE6 735 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZFP90Q8TF47 636 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 RNF139Q8WU17 664 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ELMO1Q92556 727 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 CREB3L1Q96BA8 519 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 FAM3DQ96BQ1 224 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 BMFQ96LC9 184 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 MYCBPQ99417 103 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ATP5SQ99766 215 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 CENPKQ9BS16 269 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 TMEM175Q9BSA9 504 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 RSPO3Q9BXY4 272 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 NOX3Q9HBY0 568 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 SLC40A1Q9NP59 571 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 LSM7Q9UK45 103 aaKnown RBP1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 GOLT1BQ9Y3E0 138 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 KCNE3Q9Y6H6 103 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZFHX3Q15911 3703 aa1.67□□□□□ -2.14
HMGB1P31-201ENST00000437242 MN1Q10571 1320 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 C2CD3Q4AC94 2353 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 POLQO75417 2590 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGLV4-60A0A075B6I1 120 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGHV3-74A0A0B4J1X5 117 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGHV1OR15-9A0A0B4J2B8 117 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGHV5-51A0A0C4DH38 117 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 GLYATL1P3A0A0U1RQE8 302 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 TRIM64CA6NLI5 447 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 LRRIQ3A6PVS8 624 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 TRDMT1O14717 391 aaKnown RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 RAB29O14966 203 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 SLC37A4O43826 429 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CLPXO76031 633 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 TDP2O95551 362 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 AIFM1O95831 613 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 TSPAN13O95857 204 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGKV1-17P01599 117 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 FOLR1P15328 257 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IGFBP3P17936 291 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 GABRG2P18507 467 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 P2RY2P41231 377 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 NAMPTP43490 491 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 TMED10P49755 219 aaKnown RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CDH6P55285 790 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 RAB10P61026 200 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 KDSRQ06136 332 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 LAMTOR4Q0VGL1 99 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 DEFB116Q30KQ4 102 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CCNJQ5T5M9 372 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 HES5Q5TA89 166 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 C9orf135Q5VTT2 229 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CARD17Q5XLA6 110 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 OR52W1Q6IF63 320 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 SLC8B1Q6J4K2 584 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 DUX4L9Q6RFH8 374 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZFP2Q6ZN57 461 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 FAM92BQ6ZTR7 304 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 OAFQ86UD1 273 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 IQCKQ8N0W5 287 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 GTPBP8Q8N3Z3 284 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 C15orf56Q8N910 161 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 HSD17B11Q8NBQ5 300 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 NOXO1Q8NFA2 376 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 TSTD1Q8NFU3 115 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 ESR2Q92731 530 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CNDP1Q96KN2 507 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 PKNOX2Q96KN3 472 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 SERPINB12Q96P63 405 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 OR2A5Q96R48 311 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CHAC1Q9BUX1 264 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 PSTPIP2Q9H939 334 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 FGF20Q9NP95 211 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 GPATCH2LQ9NWQ4 482 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 UXTQ9UBK9 157 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 KIAA1257Q9ULG3 409 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 RABL2BQ9UNT1 228 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 MYH11P35749 1972 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 MED13Q9UHV7 2174 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 SHANK1Q9Y566 2161 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 SPTAN1Q13813 2472 aaKnown RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 ZNF469Q96JG9 3925 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 SPTA1P02549 2419 aa1.66□□□□□ -2.14
HMGB1P31-201ENST00000437242 NUP214P35658 2090 aaPredicted RBP1.65□□□□□ -2.14
HMGB1P31-201ENST00000437242 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
HMGB1P31-201ENST00000437242 LRRK2Q5S007 2527 aa1.65□□□□□ -2.15
HMGB1P31-201ENST00000437242 MED13LQ71F56 2210 aa1.65□□□□□ -2.15
HMGB1P31-201ENST00000437242 LYRM9A8MSI8 78 aa1.65□□□□□ -2.15
HMGB1P31-201ENST00000437242 F6UB75 175 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms