RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 OR51V1Q9H2C8 321 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 NDRG3Q9UGV2 375 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 FBXL3Q9UKT7 428 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 AMDHD2Q9Y303 409 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 PCNX1Q96RV3 2341 aa12.66□□□□□ -0.38
SGCE-202ENST00000415788 ARPC4-TTLL3A0A0A6YYG9 625 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 PLSCR5A0PG75 271 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 ATP6V1G2-DDX39BF2Z307 99 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 L7N2F9 121 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 TOR1AO14656 332 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 B3GALNT1O75752 331 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 GLCEO94923 617 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 MT-ND4P03905 459 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 CLUP10909 449 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 CDAP32320 146 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 GDNFP39905 211 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 LSM6P62312 80 aaKnown RBP12.65□□□□□ -0.38
SGCE-202ENST00000415788 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 KCNMB1Q16558 191 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 UBE2NLQ5JXB2 153 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 BEST4Q8NFU0 473 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 NABP1Q96AH0 204 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 MUCL1Q96DR8 90 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 MED20Q9H944 212 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 SLC17A5Q9NRA2 495 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 PFDN2Q9UHV9 154 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 FREM1Q5H8C1 2179 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 A0A096LPE4 126 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 A0A1W2PPZ6 126 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 GATBO75879 557 aaKnown RBP12.65□□□□□ -0.38
SGCE-202ENST00000415788 TPPPO94811 219 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 HLA-DQA2P01906 255 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 TFP02787 698 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 HPXP02790 462 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 GYPBP06028 91 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 CD1AP06126 327 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 EPXP11678 715 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 SLC2A5P22732 501 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 CALCRP30988 508 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 PYCR1P32322 319 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 POU4F2Q12837 409 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 TSC22D1Q15714 1073 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 SGCAQ16586 387 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 FAM27D1Q5T7N8 215 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 LINC01590Q5TEZ4 76 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 RGS7BPQ6MZT1 257 aaPredicted RBP12.65□□□□□ -0.38
SGCE-202ENST00000415788 OR6K6Q8NGW6 343 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 ST8SIA4Q92187 359 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 PHYHIPQ92561 330 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 GPN1Q9HCN4 374 aaPredicted RBP12.65□□□□□ -0.38
SGCE-202ENST00000415788 HAO2Q9NYQ3 351 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 KCNG2Q9UJ96 466 aa12.65□□□□□ -0.38
SGCE-202ENST00000415788 SULT1B1O43704 296 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 WNT11O96014 354 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 ATF1P18846 271 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 GRNP28799 593 aaKnown RBP12.64□□□□□ -0.39
SGCE-202ENST00000415788 PCBD1P61457 104 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 HIKESHIQ53FT3 197 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 OR10H5Q8NGA6 315 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 OR51L1Q8NGJ5 315 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 TBX5Q99593 518 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 BRD7Q9NPI1 651 aa12.64□□□□□ -0.39
SGCE-202ENST00000415788 MRPS7Q9Y2R9 242 aaKnown RBP12.64□□□□□ -0.39
SGCE-202ENST00000415788 FAM171A2A8MVW0 826 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 SNRPGP15A8MWD9 76 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 A8MXK9 166 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 GABARAPH6UMI1 98 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 MTRF1O75570 445 aaKnown RBP12.63□□□□□ -0.39
SGCE-202ENST00000415788 IL5P05113 134 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 CST2P09228 141 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 SBK2P0C263 348 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 ZNF823P16415 610 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 IGFBP2P18065 325 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 NFYAP23511 347 aaPredicted RBP12.63□□□□□ -0.39
SGCE-202ENST00000415788 MRPS10P82664 201 aaKnown RBP12.63□□□□□ -0.39
SGCE-202ENST00000415788 GLDNQ6ZMI3 551 aaPredicted RBP12.63□□□□□ -0.39
SGCE-202ENST00000415788 SYT9Q86SS6 491 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 OR6M1Q8NGM8 313 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 SCARB1Q8WTV0 552 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 PCNPQ8WW12 178 aaKnown RBP12.63□□□□□ -0.39
SGCE-202ENST00000415788 ZNRF4Q8WWF5 429 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 C11orf40Q8WZ69 217 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 C4orf36Q96KX1 117 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 LINC00052Q96N35 136 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 TEAD3Q99594 435 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 HRASLSQ9HDD0 168 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 MGAT4CQ9UBM8 478 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 SLC25A15Q9Y619 301 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 PRSS44E7EML9 344 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 E9PI62 339 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 J3QLW9 94 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 OGG1O15527 345 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 OR2A4O95047 310 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 ALDOBP05062 364 aa12.63□□□□□ -0.39
SGCE-202ENST00000415788 SNRPBP14678 240 aaKnown RBP12.63□□□□□ -0.39
SGCE-202ENST00000415788 ZNF19P17023 458 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms