RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 KLF3P57682 345 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 SRSF1Q07955 248 aaKnown RBP eCLIP20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 CNN3Q15417 329 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 TMEM171Q8WVE6 324 aa20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 PIK3IP1Q96FE7 263 aa20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 CPNE2Q96FN4 548 aaPredicted RBP20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 TAS2R4Q9NYW5 299 aa20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 PURGQ9UJV8 347 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-202ENST00000397396 PRR14LQ5THK1 2151 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 DOPEY1Q5JWR5 2465 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 ANKRD61A6NGH8 418 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 SHISA9B4DS77 424 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 MAGEB3O15480 346 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 TIMM8AO60220 97 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 CDRT1O95170 752 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 RANBP1P43487 201 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 PSG7Q13046 419 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 TNK1Q13470 666 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 DAZAP2Q15038 168 aaPredicted RBP20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 TMEM42Q69YG0 159 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 OR2T2Q6IF00 324 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 CROCCP3Q8IVE0 287 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 TMEM204Q9BSN7 226 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 RNF167Q9H6Y7 350 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 MPC1Q9Y5U8 109 aa20.22■□□□□ 0.83
TSPAN4-202ENST00000397396 HEATR1Q9H583 2144 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 TRIM64BA6NI03 449 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 ANXA2P2A6NMY6 339 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 LMX1BO60663 402 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 IGHV3-13P01766 116 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 RNF224P0DH78 156 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 RAB3BP20337 219 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 SDC2P34741 201 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 MPV17P39210 176 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 FABP6P51161 128 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 ZNF529Q6P280 563 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 VHLLQ6RSH7 139 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 OR1M1Q8NGA1 313 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 OR13C9Q8NGT0 318 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 NDNFQ8TB73 568 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 MRPL24Q96A35 216 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 SPSB1Q96BD6 273 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 PAPOLGQ9BWT3 736 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 PPIL3Q9H2H8 161 aaKnown RBP20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 TMEM138Q9NPI0 162 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 GPR160Q9UJ42 338 aa20.21■□□□□ 0.83
TSPAN4-202ENST00000397396 IGLV3-9A0A075B6K5 115 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 TMEM127O75204 238 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 NRASP01111 189 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 PRKACBP22694 351 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 BDKRB2P30411 391 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 SOX6P35712 828 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 SPCS2Q15005 226 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 CDH26Q8IXH8 852 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 OR8G5Q8NG78 346 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 HIST1H2AAQ96QV6 131 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 CYSLTR2Q9NS75 346 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 SLC7A11Q9UPY5 501 aa20.2■□□□□ 0.82
TSPAN4-202ENST00000397396 TRAV8-7A0A075B6U6 113 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 ATF1P18846 271 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 EVX1P49640 407 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 GLT8D1Q68CQ7 371 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 ZDHHC23Q8IYP9 409 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 BHLHE23Q8NDY6 225 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 UBASH3BQ8TF42 649 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 PIGCQ92535 297 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 FOXRED1Q96CU9 486 aaPredicted RBP20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 CCDC59Q9P031 241 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 DUSP13Q9UII6 198 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 RHBDD3Q9Y3P4 386 aa20.19■□□□□ 0.82
TSPAN4-202ENST00000397396 SIAH2O43255 324 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 GMDSO60547 372 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 MAS1P04201 325 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 ALDOBP05062 364 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 LOXP28300 417 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 TGFBR1P36897 503 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 PRSS12P56730 875 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 ZNF672Q499Z4 452 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 PLCXD3Q63HM9 321 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 LRRTM1Q86UE6 522 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 DNAAF1Q8NEP3 725 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 SLC25A46Q96AG3 418 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 ORAI1Q96D31 301 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 MYO18BQ8IUG5 2567 aa20.18■□□□□ 0.82
TSPAN4-202ENST00000397396 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 A0A1W2PPW3 197 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 PLSCR5A0PG75 271 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 A6NIN4 97 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 NOTOA8MTQ0 251 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 APOBEC3AP31941 199 aaPredicted RBP20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 RORCP51449 518 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 MXD1Q05195 221 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 MZT1Q08AG7 82 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 PRDX4Q13162 271 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 CEP78Q5JTW2 689 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 ASPHD2Q6ICH7 369 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 OR5AS1Q8N127 324 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 SPERTQ8NA61 448 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 DYNC2LI1Q8TCX1 351 aa20.17■□□□□ 0.82
TSPAN4-202ENST00000397396 PLK3Q9H4B4 646 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms