RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SOX6P35712 828 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 MTNR1BP49286 362 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 TAB1Q15750 504 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 DGUOKQ16854 277 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 C11orf91Q3C1V1 193 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 SSX8Q7RTT4 187 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 CCDC54Q8NEL0 328 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 AKAP1Q92667 903 aaKnown RBP eCLIP11.41□□□□□ -0.58
SEC13-209ENST00000397117 SGK3Q96BR1 496 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 WFIKKN1Q96NZ8 548 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 MED18Q9BUE0 208 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 OR10A4Q9H209 315 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 TPK1Q9H3S4 243 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 PLEKHA1Q9HB21 404 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 TCF7L1Q9HCS4 588 aa11.41□□□□□ -0.58
SEC13-209ENST00000397117 ZNF275Q9NSD4 429 aaPredicted RBP11.41□□□□□ -0.58
SEC13-209ENST00000397117 CRNNQ9UBG3 495 aaPredicted RBP11.41□□□□□ -0.58
SEC13-209ENST00000397117 CHD3Q12873 2000 aaKnown RBP11.41□□□□□ -0.58
SEC13-209ENST00000397117 SONP18583 2426 aaKnown RBP11.41□□□□□ -0.58
SEC13-209ENST00000397117 USF3Q68DE3 2245 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 TRBV5-7A0A0A0MS05 114 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 TRAV1-2A0A0B4J238 106 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 C5orf63A6NC05 138 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 INAFM1C9JVW0 142 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 PPP3CBP16298 524 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 CCL1P22362 96 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 ANOS1P23352 680 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 CFL1P23528 166 aaKnown RBP11.4□□□□□ -0.58
SEC13-209ENST00000397117 RPS19P39019 145 aaKnown RBP11.4□□□□□ -0.58
SEC13-209ENST00000397117 ZNF83P51522 516 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 GLYATL3Q5SZD4 288 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 UNQ6126/PRO20091Q6UXV3 157 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 COLCA1Q6ZS62 124 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 MYPOPQ86VE0 399 aaPredicted RBP11.4□□□□□ -0.58
SEC13-209ENST00000397117 TPRA1Q86W33 373 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 PAQR4Q8N4S7 273 aaPredicted RBP11.4□□□□□ -0.58
SEC13-209ENST00000397117 OR5L1Q8NGL2 311 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 OR2AE1Q8NHA4 323 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 FGGYQ96C11 551 aa11.4□□□□□ -0.58
SEC13-209ENST00000397117 MXRA5Q9NR99 2828 aa11.4□□□□□ -0.59
SEC13-209ENST00000397117 IGHV1-18A0A0C4DH31 117 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 M0R1B8 84 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 PDCD5O14737 125 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 PIN1P1O15428 100 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 DHRS3O75911 302 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 IGLV1-44P01699 117 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 IGLV3-1P01715 115 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 CECR9P0C854 216 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 CCKARP32238 428 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 GNALP38405 381 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 WNT5AP41221 380 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 RORCP51449 518 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 C3orf36Q3SXR2 165 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 SERPINA12Q8IW75 414 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 SLC25A46Q96AG3 418 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 ORAI1Q96D31 301 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 LYZL4Q96KX0 146 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 OR51B6Q9H340 312 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 TBCCD1Q9NVR7 557 aa11.39□□□□□ -0.59
SEC13-209ENST00000397117 CCDC59Q9P031 241 aaKnown RBP11.39□□□□□ -0.59
SEC13-209ENST00000397117 LOC390937A0A1W2PQ73 354 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 J3QW42 95 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 CLEC2LP0C7M8 214 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 RAB3BP20337 219 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 LOXP28300 417 aaPredicted RBP11.38□□□□□ -0.59
SEC13-209ENST00000397117 PPP3R1P63098 170 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 ZNF92Q03936 586 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 HNRNPA0Q13151 305 aaKnown RBP11.38□□□□□ -0.59
SEC13-209ENST00000397117 MRPL21Q7Z2W9 205 aaKnown RBP11.38□□□□□ -0.59
SEC13-209ENST00000397117 PLPP7Q8NBV4 271 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 SEMA6DQ8NFY4 1073 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 OR5D14Q8NGL3 314 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 CCL19Q99731 98 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 SOX7Q9BT81 388 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
SEC13-209ENST00000397117 OPA3Q9H6K4 179 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 STARD10Q9Y365 291 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 ANK3Q12955 4377 aaKnown RBP11.38□□□□□ -0.59
SEC13-209ENST00000397117 SHISA3A0PJX4 238 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 SMIM30A4D0T7 59 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 ANKRD61A6NGH8 418 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 A6NIN4 97 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 DHRS7CA6NNS2 312 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 LMX1BO60663 402 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 CLPXO76031 633 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 NGFP01138 241 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 RAD52P43351 418 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 MAP2K3P46734 347 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 RIPPLY1Q0D2K3 151 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PGAP1Q75T13 922 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 WFDC8Q8IUA0 241 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 ZNF101Q8IZC7 436 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PARP16Q8N5Y8 322 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 OR14K1Q8NGZ2 314 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 TBC1D15Q8TC07 691 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 IGFBPL1Q8WX77 278 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 SPSB4Q96A44 273 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PIK3IP1Q96FE7 263 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 PERPQ96FX8 193 aa11.38□□□□□ -0.59
SEC13-209ENST00000397117 ZC3HAV1LQ96H79 300 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms