RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 PHYHIPQ92561 330 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 TAS2R10Q9NYW0 307 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 G3V3Y1 287 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 GLCEO94923 617 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 GSTP1P09211 210 aaKnown RBP16.84■□□□□ 0.29
CCDC50-202ENST00000392456 MLF1P58340 268 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 NKPD1Q17RQ9 610 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 MDGA2Q7Z553 956 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 HIST3H2BBQ8N257 126 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 TAAR8Q969N4 342 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 GPR87Q9BY21 358 aa16.84■□□□□ 0.29
CCDC50-202ENST00000392456 C21orf140B9A014 251 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 PHOX2AO14813 284 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 RGS9O75916 674 aaPredicted RBP16.83■□□□□ 0.28
CCDC50-202ENST00000392456 PPP1R3DO95685 299 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 CCL3P10147 92 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 GP1BBP13224 206 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 MST1LQ2TV78 715 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 TMPRSS12Q86WS5 348 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 THNSL2Q86YJ6 484 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 PSMF1Q92530 271 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 HCAR1Q9BXC0 346 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 OR11A1Q9GZK7 315 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 MED20Q9H944 212 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 TNFSF18Q9UNG2 199 aa16.83■□□□□ 0.28
CCDC50-202ENST00000392456 TMEM272A0A1B0GTI8 110 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 OR2AT4A6NND4 320 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 M0R143 59 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 EFSO43281 561 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 NDUFB6O95139 128 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 RCBTB2O95199 551 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 CXCR1P25024 350 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 THBS4P35443 961 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 NOVA1P51513 510 aaKnown RBP16.82■□□□□ 0.28
CCDC50-202ENST00000392456 SLC10A1Q14973 349 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 ZNF74Q16587 644 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 RIPPLY2Q5TAB7 128 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 ATP1A1-AS1Q5TC04 95 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 OLFML2AQ68BL7 652 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 FOXRED2Q8IWF2 684 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 IL22RA1Q8N6P7 574 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 C10orf53Q8N6V4 93 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 TEX19Q8NA77 164 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 RHOFQ9HBH0 211 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 PROK2Q9HC23 129 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 ADAM18Q9Y3Q7 739 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 WIF1Q9Y5W5 379 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 C7orf77A4D0Y5 90 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 M0QZK8 103 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 IL11P20809 199 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 UBE2MP61081 183 aaKnown RBP16.82■□□□□ 0.28
CCDC50-202ENST00000392456 ACSM1Q08AH1 577 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 MEF2DQ14814 521 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 BPIFB2Q8N4F0 458 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 RNASE8Q8TDE3 154 aaKnown RBP16.82■□□□□ 0.28
CCDC50-202ENST00000392456 HINT3Q9NQE9 182 aaKnown RBP16.82■□□□□ 0.28
CCDC50-202ENST00000392456 CHRNA9Q9UGM1 479 aa16.82■□□□□ 0.28
CCDC50-202ENST00000392456 TMED7-TICAM2A0A0A6YYA0 188 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 A0A1W2PPQ1 181 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 ANKRD61A6NGH8 418 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 RNASEK-C17orf49H0YIS7 233 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 CSRP1P21291 193 aaKnown RBP16.81■□□□□ 0.28
CCDC50-202ENST00000392456 IL2RGP31785 369 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 SSR4P51571 173 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 SRSF6Q13247 344 aaKnown RBP16.81■□□□□ 0.28
CCDC50-202ENST00000392456 ODF4Q2M2E3 257 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 FBXW9Q5XUX1 488 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 ESPNLQ6ZVH7 1005 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 CPOQ8IVL8 374 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 CPAMD8Q8IZJ3 1885 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 TMEM156Q8N614 296 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 OR52L1Q8NGH7 329 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 ADAMTS17Q8TE56 1095 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 NPRL2Q8WTW4 380 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 OR14J1Q9UGF5 321 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 TMED7Q9Y3B3 224 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 OR5H15A6NDH6 313 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 ANKUB1A6NFN9 424 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 GGT3PA6NGU5 568 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 OR5H1A6NKK0 313 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 FGF7P21781 194 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 DTX1Q86Y01 620 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 CYB561A3Q8NBI2 242 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 PTPRBP23467 1997 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 FRYQ5TBA9 3013 aa16.81■□□□□ 0.28
CCDC50-202ENST00000392456 CDRT15L2A8MXV6 281 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 MFNGO00587 321 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 TP53I11O14683 189 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 EFNA2O43921 213 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 AQP2P41181 271 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 CAV2P51636 162 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 AWAT1Q58HT5 328 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 ARSJQ5FYB0 599 aaPredicted RBP16.8■□□□□ 0.28
CCDC50-202ENST00000392456 HIST2H3PS2Q5TEC6 136 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 OPN5Q6U736 354 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 GRINAQ7Z429 371 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 GPR148Q8TDV2 347 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 GSX1Q9H4S2 264 aaPredicted RBP16.8■□□□□ 0.28
CCDC50-202ENST00000392456 DLL3Q9NYJ7 618 aa16.8■□□□□ 0.28
CCDC50-202ENST00000392456 RNF222A6NCQ9 220 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms