RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 TAS2R19P59542 299 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 C1orf140Q5VVS0 124 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 KCTD18Q6PI47 426 aaPredicted RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 PAPD4Q6PIY7 484 aaKnown RBP11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 PHYHIPQ92561 330 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 NEU1Q99519 415 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 GPER1Q99527 375 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 CHST5Q9GZS9 411 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 CNTD2Q9H8S5 307 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 MUC3AQ02505 3323 aa11.09□□□□□ -0.63
PRPF40B-202ENST00000380281 A0A1B0GV50 99 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 NPIPA5E9PKD4 350 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 LRP3O75074 770 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 ADAP1O75689 374 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC25A1P53007 311 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 GLO1Q04760 184 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 PTCRAQ6ISU1 281 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 C9orf40Q8IXQ3 194 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC30A7Q8NEW0 376 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 FOXRED1Q96CU9 486 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 RAB33BQ9H082 229 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 TAS2R8Q9NYW2 309 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 OR52A1Q9UKL2 312 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 HHLA2Q9UM44 414 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 NPIPA1Q9UND3 350 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 MUC22E2RYF6 1773 aaPredicted RBP11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 FBXO24O75426 580 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 TXNDC12O95881 172 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 SFTPDP35247 375 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 PPICP45877 212 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 ACTBP60709 375 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 LSM6P62312 80 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 ACTG1P63261 375 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 OR2A2Q6IF42 318 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 C1orf198Q9H425 327 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 CYTL1Q9NRR1 136 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 A0A1W2PNR3 127 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 A0A1W2PPC1 479 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 IL33O95760 270 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 RAB6AP20340 208 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 MEF2DQ14814 521 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 NSUN5P2Q63ZY6 315 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 AWAT2Q6E213 333 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 OR13C8Q8NGS7 320 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 GPX8Q8TED1 209 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 ST6GALNAC5Q9BVH7 336 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 SUSD2Q9UGT4 822 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 MMP24Q9Y5R2 645 aa11.08□□□□□ -0.64
PRPF40B-202ENST00000380281 THADAQ6YHU6 1953 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 TRAV36DV7A0A075B6V5 113 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF354AO60765 605 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 STK17BO94768 372 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 HOXB5P09067 269 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 OR8U9P0C7N5 309 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 HOXA5P20719 270 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 ANOS1P23352 680 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 HSD17B7P56937 341 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 YPEL5P62699 121 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 FBXO46Q6PJ61 603 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 BATF2Q8N1L9 274 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 ZSCAN4Q8NAM6 433 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 OR8U1Q8NH10 309 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 OR51E1Q8TCB6 317 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC25A43Q8WUT9 341 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 RGCCQ9H4X1 137 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 UPB1Q9UBR1 384 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 SLC5A6Q9Y289 635 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 RP1L1Q8IWN7 2480 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 SYT7O43581 403 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 KNG1P01042 644 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 BGLAPP02818 100 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 CLPSP04118 112 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 PGCP20142 388 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 PAX6P26367 422 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 LBX1P52954 281 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 S100A10P60903 97 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 TLE3Q04726 772 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 OR8G1Q15617 311 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 ANGPTL5Q86XS5 388 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 C8orf44Q96CB5 159 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 ADAT3Q96EY9 351 aaPredicted RBP11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 DNAJB11Q9UBS4 358 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 COPS7AQ9UBW8 275 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 AMDHD2Q9Y303 409 aa11.07□□□□□ -0.64
PRPF40B-202ENST00000380281 MED19A0JLT2 244 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SOX15O60248 233 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 CAPZBP47756 277 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 CDX1P47902 265 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 BIDP55957 195 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ARFRP1Q13795 201 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 ZNF440Q8IYI8 595 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 RNF128Q8TEB7 428 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 TCTN2Q96GX1 697 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 JSRP1Q96MG2 331 aaPredicted RBP11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 GPR61Q9BZJ8 451 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SMIM3Q9BZL3 60 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 SPACA1Q9HBV2 294 aa11.06□□□□□ -0.64
PRPF40B-202ENST00000380281 DOK5Q9P104 306 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms