RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 C2CD4CQ8TF44 421 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 ADAM19Q9H013 955 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 ZNF768Q9H5H4 540 aaKnown RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 CDCP1Q9H5V8 836 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 TMEM231Q9H6L2 316 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 CALHM2Q9HA72 323 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 DNAJB12Q9NXW2 375 aaKnown RBP7.55□□□□□ -1.2
VPS36-201ENST00000378060 LRP12Q9Y561 859 aa7.55□□□□□ -1.2
VPS36-201ENST00000378060 IGHV3-20A0A0C4DH32 117 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 A0A1W2PPC4 97 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ZNF727A8MUV8 499 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 G3V3Y1 287 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 MBP02144 154 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 RRASP10301 218 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 FPR2P25090 351 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 OPRM1P35372 400 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 GABRA2P47869 451 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 PLGLAQ15195 96 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ZIC1Q15915 447 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ARTNQ5T4W7 220 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 TMEM88Q6PEY1 159 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 THSD4Q6ZMP0 1018 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 BAGE3Q86Y29 109 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 MUC20Q8N307 709 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 AMER3Q8N944 861 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 OR11L1Q8NGX0 322 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 OR51H1Q8NH63 302 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 FGF14Q92915 247 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 APH1AQ96BI3 265 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 OR2A5Q96R48 311 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 TRIM64BA6NI03 449 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 F10P00742 488 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 GLULP15104 373 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 RPA2P15927 270 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 AVPR2P30518 371 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 PIGPP57054 158 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ZNF92Q03936 586 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ZNF141Q15928 474 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 FAM199XQ6PEV8 388 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 ZNF547Q8IVP9 402 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 COX14Q96I36 57 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 FER1L6-AS2Q96M78 137 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 PLA2G2FQ9BZM2 168 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ANKUB1A6NFN9 424 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 RNASEK-C17orf49H0YIS7 233 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 KLRC4-KLRK1H3BQV0 150 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 CDC42EP2O14613 210 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 TIMM8AO60220 97 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 GREM1O60565 184 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 CTAG2O75638 210 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 HOXC4P09017 264 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 CISD3P0C7P0 127 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 SULT1A3P0DMM9 295 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 SULT1A4P0DMN0 295 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 INSL4Q14641 139 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ISXQ2M1V0 245 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 PLA1AQ53H76 456 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 FAHD2BQ6P2I3 314 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 SYT13Q7L8C5 426 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 HGDQ93099 445 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 LHX4Q969G2 390 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 SPSB1Q96BD6 273 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 KTI12Q96EK9 354 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 FAHD2AQ96GK7 314 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 TECTBQ96PL2 329 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 TRAF4Q9BUZ4 470 aaPredicted RBP7.54□□□□□ -1.2
VPS36-201ENST00000378060 RTL8AQ9BWD3 113 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 MMP26Q9NRE1 261 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 CACFD1Q9UGQ2 172 aa7.54□□□□□ -1.2
VPS36-201ENST00000378060 ZNF732B4DXR9 585 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 PDGFBP01127 241 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 GLI4P10075 376 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 RRADP55042 308 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 ZNF121P58317 390 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 YBX1P67809 324 aaKnown RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.53□□□□□ -1.2
VPS36-201ENST00000378060 OR8G2PQ6IF36 304 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 ZNF425Q6IV72 752 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 CATSPERDQ86XM0 798 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 TP53I13Q8NBR0 393 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 SMRP1Q8NCR6 262 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 C11orf40Q8WZ69 217 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 PRRX2Q99811 253 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 SPTY2D1-AS1A0A0U1RR47 76 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 LINC00862A6NCI5 91 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 HSD17B6O14756 317 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 DUS4LO95620 317 aaKnown RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 WNT11O96014 354 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 SEMG1P04279 462 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 HOXA1P49639 335 aaPredicted RBP7.53□□□□□ -1.2
VPS36-201ENST00000378060 IFITM3Q01628 133 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 MESP2Q0VG99 397 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 HAGHQ16775 308 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 TBC1D28Q2M2D7 210 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 PRICKLE4Q2TBC4 344 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 PWWP2BQ6NUJ5 590 aa7.53□□□□□ -1.2
VPS36-201ENST00000378060 TRILQ7L0X0 811 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms