RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 STUMQ69YW2 141 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 SLC51BQ86UW2 128 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 OR2Y1Q8NGV0 311 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 NIPSNAP3BQ9BS92 247 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 TNFRSF19Q9NS68 423 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 TAAR3PQ9P1P4 343 aa12.21□□□□□ -0.46
GPC6-201ENST00000377047 PIGPP57054 158 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 PDCD1Q15116 288 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 PABPC1L2AQ5JQF8 200 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 C17orf107Q6ZR85 190 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 DUSP15Q9H1R2 295 aaPredicted RBP12.2□□□□□ -0.46
GPC6-201ENST00000377047 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
GPC6-201ENST00000377047 IGHV5-10-1A0A0J9YXX1 117 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 LRP3O75074 770 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 GPX8Q8TED1 209 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 EID2BQ96D98 161 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 RER1O15258 196 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 CT62P0C5K7 136 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 OR13C7P0DN81 318 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 P2RX3P56373 397 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 VN1R4Q7Z5H5 301 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 SOX7Q9BT81 388 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 PATZ1Q9HBE1 687 aaKnown RBP12.2□□□□□ -0.46
GPC6-201ENST00000377047 MED9Q9NWA0 146 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 ZNF32P17041 273 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 KLF3P57682 345 aaPredicted RBP12.2□□□□□ -0.46
GPC6-201ENST00000377047 TAS2R45P59539 299 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 KDF1Q8NAX2 398 aaPredicted RBP12.2□□□□□ -0.46
GPC6-201ENST00000377047 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 PP6455Q8WZ26 134 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 UBTD1Q9HAC8 227 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 DDOSTP39656 456 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 TIGD3Q6B0B8 471 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 SH2D5Q6ZV89 423 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 SPRED2Q7Z698 418 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 UBALD1Q8TB05 177 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 EXTL1Q92935 676 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 SLC35B4Q969S0 331 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 TM4SF19Q96DZ7 209 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 OR8B4Q96RC9 309 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 FGF20Q9NP95 211 aaPredicted RBP12.2□□□□□ -0.46
GPC6-201ENST00000377047 PSENENQ9NZ42 101 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 AK3Q9UIJ7 227 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
GPC6-201ENST00000377047 TEX51A0A1B0GUA7 166 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 CDX4O14627 284 aaPredicted RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 BPIFB3P59826 476 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 CD276Q5ZPR3 534 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 OR4Q3Q8NH05 313 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 DOK1Q99704 481 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 RAB1BQ9H0U4 201 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 FBXO34Q9NWN3 711 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 MEX3AA1L020 520 aaKnown RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 CD3DP04234 171 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 CD3EP07766 207 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 GABRA1P14867 456 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 HNF1AP20823 631 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 NDUFA6P56556 154 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 BHLHA15Q7RTS1 189 aaPredicted RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 MFSD4AQ8N468 514 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 MOB3AQ96BX8 217 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 NRTNQ99748 197 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 ADAMTSL1Q8N6G6 1762 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 SNRPNP63162 240 aaKnown RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 DHODHQ02127 395 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 TOMM34Q15785 309 aaPredicted RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 DRAM2Q6UX65 266 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 Q8IYB0 196 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 KCNRGQ8N5I3 272 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 RND1Q92730 232 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 LAMB2P55268 1798 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 HOXC8P31273 242 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 TGFBR1P36897 503 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 TAGLN2P37802 199 aaKnown RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 MAGEA5P43359 124 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 KIR2DL1P43626 348 aaPredicted RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 PPP1CBP62140 327 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 APH1BQ8WW43 257 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 ERGIC1Q969X5 290 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 NDFIP1Q9BT67 221 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 C20orf141Q9NUB4 165 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
GPC6-201ENST00000377047 OR7C2O60412 319 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 DDOQ99489 341 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
GPC6-201ENST00000377047 SCGB1D1O95968 90 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 TGM1P22735 817 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
GPC6-201ENST00000377047 BAGE3Q86Y29 109 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 BAGE2Q86Y30 109 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 ADAM19Q9H013 955 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 THSD7AQ9UPZ6 1657 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 C21orf140B9A014 251 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 ST8SIA5O15466 376 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 CYC1P08574 325 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 RPEQ96AT9 228 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
GPC6-201ENST00000377047 SERTM1A2A2V5 107 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms