RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 WDFY3Q8IZQ1 3526 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 A0A1B0GTQ1 180 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 LIPT2A6NK58 231 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SLC17A2O00624 439 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SGCEO43556 437 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SYNGR4O95473 234 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 CER1O95813 267 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 GAAP10253 952 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 CD96P40200 585 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 PMP22Q01453 160 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 ZNF616Q08AN1 781 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 TMPPEQ6ZT21 453 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 MRGPREQ86SM8 312 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SLC22A24Q8N4F4 322 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 ZNF75AQ96N20 296 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SPSB2Q99619 263 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 AIFM2Q9BRQ8 373 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 KCNS2Q9ULS6 477 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 C5orf49A4QMS7 147 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 D6RAR5 112 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 RAB27BO00194 218 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 XRCC2O43543 280 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 DIRAS3O95661 229 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 OR4E1P0C645 316 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SLC35A1P78382 337 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 C5orf24Q7Z6I8 188 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 SECTM1Q8WVN6 248 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 GPR160Q9UJ42 338 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 C14orf166Q9Y224 244 aaKnown RBP10.34□□□□□ -0.75
DDR1-227ENST00000376570 CACNA1AO00555 2505 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 MEGF11A6BM72 1044 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 WRBO00258 174 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 XRCC3O43542 346 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 EFNA2O43921 213 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 HLXQ14774 488 aaPredicted RBP10.34□□□□□ -0.75
DDR1-227ENST00000376570 ZNF585AQ6P3V2 769 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 OGFOD3Q6PK18 319 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 CCDC36Q8IYA8 594 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 VRK1Q99986 396 aaPredicted RBP10.34□□□□□ -0.75
DDR1-227ENST00000376570 FAAP24Q9BTP7 215 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 B3GALT5Q9Y2C3 310 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 CHD8Q9HCK8 2581 aa10.34□□□□□ -0.75
DDR1-227ENST00000376570 A0A0J9YW62 118 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ABHD16AO95870 558 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 CELA3AP09093 270 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ZNF44P15621 663 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 GLRA1P23415 457 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 SLC25A1P53007 311 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 EGR3Q06889 387 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 OR2B11Q5JQS5 317 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 MYPOPQ86VE0 399 aaPredicted RBP10.33□□□□□ -0.76
DDR1-227ENST00000376570 OR2AK2Q8NG84 335 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ASB10Q8WXI3 467 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 REEP6Q96HR9 211 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 CDC6Q99741 560 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 HAO2Q9NYQ3 351 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ZNF629Q9UEG4 869 aaPredicted RBP10.33□□□□□ -0.76
DDR1-227ENST00000376570 TO15178 435 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 DHHO43323 396 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 PPP3CBP16298 524 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ZNF32P17041 273 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 PPP1R1AQ13522 171 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 PCK2Q16822 640 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 KRBOX4Q5JUW0 171 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 MRPL21Q7Z2W9 205 aaKnown RBP10.33□□□□□ -0.76
DDR1-227ENST00000376570 SPTSSAQ969W0 71 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 CMSS1Q9BQ75 279 aaKnown RBP10.33□□□□□ -0.76
DDR1-227ENST00000376570 MBD2Q9UBB5 411 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 NOTCH3Q9UM47 2321 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 CCDC187A0A096LP49 1063 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 SERPINF1P36955 418 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 CAV2P51636 162 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 KLF9Q13886 244 aaPredicted RBP10.33□□□□□ -0.76
DDR1-227ENST00000376570 BEND4Q6ZU67 534 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 CLEC1AQ8NC01 280 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ADAD2Q8NCV1 583 aaKnown RBP10.33□□□□□ -0.76
DDR1-227ENST00000376570 ST8SIA1Q92185 356 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ZNF700Q9H0M5 742 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 FAM234AQ9H0X4 552 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 ABI3Q9P2A4 366 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 DNAJB11Q9UBS4 358 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 SPTBN4Q9H254 2564 aa10.33□□□□□ -0.76
DDR1-227ENST00000376570 PLCE1Q9P212 2302 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 SPAARA0A1B0GVQ0 90 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 PRAF2O60831 178 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 MSR1P21757 451 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 NME2P22392 152 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 HERV-K104P61576 105 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 FHL1Q13642 323 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 ACER2Q5QJU3 275 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 ATRAIDQ6UW56 229 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 SLC25A26Q70HW3 274 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 MAML2Q8IZL2 1156 aaPredicted RBP10.32□□□□□ -0.76
DDR1-227ENST00000376570 NOXO1Q8NFA2 376 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 PXT1Q8NFP0 134 aa10.32□□□□□ -0.76
DDR1-227ENST00000376570 STK35Q8TDR2 534 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms