RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 PCK2Q16822 640 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 LINC01590Q5TEZ4 76 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 MRPL21Q7Z2W9 205 aaKnown RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 ASB5Q8WWX0 329 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 CHST6Q9GZX3 395 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 PCDHB10Q9UN67 800 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 WIF1Q9Y5W5 379 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 A0A0G2JK05 382 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 MCRIP1C9JLW8 97 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 EIF1BO60739 113 aaKnown RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 TMEM127O75204 238 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 UPK3AO75631 287 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 SPP1P10451 314 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 ADRA2CP18825 462 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 PRSS12P56730 875 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 GRB2P62993 217 aaKnown RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 CNN3Q15417 329 aaKnown RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 ACTBL2Q562R1 376 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 HSD17B13Q7Z5P4 300 aaPredicted RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 KMT5CQ86Y97 462 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 SUMF2Q8NBJ7 301 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 SPACA9Q96E40 222 aaPredicted RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 RSRP1Q9BUV0 290 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 PAPOLGQ9BWT3 736 aaKnown RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 TOLLIPQ9H0E2 274 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 FN3KRPQ9HA64 309 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 FAM96BQ9Y3D0 163 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 FREM3P0C091 2139 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 A0A087WV48 116 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 M0R135 149 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 GATCO43716 136 aaKnown RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 DDAH2O95865 285 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 TCN2P20062 427 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 CARD18P57730 90 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 TAF9Q16594 264 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 MAML2Q8IZL2 1156 aaPredicted RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 CADM4Q8NFZ8 388 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 FLVCR1-AS1Q8TAF5 88 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF799Q96GE5 643 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF845Q96IR2 970 aaPredicted RBP10.94□□□□□ -0.66
COL20A1-201ENST00000358894 NICN1Q9BSH3 213 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 GPR160Q9UJ42 338 aa10.94□□□□□ -0.66
COL20A1-201ENST00000358894 DOCK8Q8NF50 2099 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PNPP00491 289 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 F12P00748 615 aaPredicted RBP10.93□□□□□ -0.66
COL20A1-201ENST00000358894 SMIM6P0DI80 62 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PTAFRP25105 342 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 C4orf17Q53FE4 359 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PHLDA2Q53GA4 152 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 LPCAT3Q6P1A2 487 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 ANKRD37Q7Z713 158 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 OXGR1Q96P68 337 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 NXT1Q9UKK6 140 aaKnown RBP10.93□□□□□ -0.66
COL20A1-201ENST00000358894 KCNS2Q9ULS6 477 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 SPTA1P02549 2419 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 LINC00587B1AMM8 73 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 K7EPK0 472 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 MBTPS2O43462 519 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 CD96P40200 585 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 FAM71E2Q8N5Q1 922 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 HSD17B11Q8NBQ5 300 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 IFI44Q8TCB0 444 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 SUCNR1Q9BXA5 334 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PRO1933Q9H354 126 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 MYOTQ9UBF9 498 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 EP300Q09472 2414 aaPredicted RBP10.93□□□□□ -0.66
COL20A1-201ENST00000358894 IGF2P01344 180 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 CRYBA1P05813 215 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PSMB6P28072 239 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PPP1R1AQ13522 171 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 HIST2H3PS2Q5TEC6 136 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF813Q6ZN06 617 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PRSS35Q8N3Z0 413 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 SPICQ8N5J4 248 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 EXD3Q8N9H8 876 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF485Q8NCK3 441 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 WNT2BQ93097 391 aa10.93□□□□□ -0.66
COL20A1-201ENST00000358894 MRPL22Q9NWU5 206 aaKnown RBP10.93□□□□□ -0.66
COL20A1-201ENST00000358894 PHOX2AO14813 284 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 MRPL33O75394 65 aaKnown RBP10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ATP1B3P54709 279 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 EGR4Q05215 589 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 SOHLH1Q5JUK2 328 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.92□□□□□ -0.66
COL20A1-201ENST00000358894 OGFOD3Q6PK18 319 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 SEZ6L2Q6UXD5 910 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ACOT7LQ6ZUV0 252 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 LYG2Q86SG7 212 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 NOXO1Q8NFA2 376 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 FRZBQ92765 325 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 ZNF275Q9NSD4 429 aaPredicted RBP10.92□□□□□ -0.66
COL20A1-201ENST00000358894 FBXO7Q9Y3I1 522 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 BPNT1O95861 308 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 CNR1P21554 472 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 UBE2KP61086 200 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 HIST2H3AQ71DI3 136 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 CNTNAP3Q9BZ76 1288 aa10.92□□□□□ -0.66
COL20A1-201ENST00000358894 LRFN1Q9P244 771 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms