RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 ZNF879B4DU55 563 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 GPX5O75715 221 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 HLA-DPB1P04440 258 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 SELEP16581 610 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 CA6P23280 308 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 CRYBB2P43320 205 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 MS4A15Q8N5U1 240 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 OR8G5Q8NG78 346 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 DERL3Q96Q80 235 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 PLEKHA1Q9HB21 404 aa21.65■■□□□ 1.06
SSBP3-202ENST00000357475 VSTM5A8MXK1 200 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 GABRPO00591 440 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 MLNRO43193 412 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 RGS9O75916 674 aaPredicted RBP21.64■■□□□ 1.05
SSBP3-202ENST00000357475 RPL5P46777 297 aaKnown RBP21.64■■□□□ 1.05
SSBP3-202ENST00000357475 SELENOVP59797 346 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 NKPD1Q17RQ9 610 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 C11orf71Q6IPW1 123 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 UNQ9370/PRO34162Q6UXP9 181 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 CEACAM19Q7Z692 300 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 SATL1Q86VE3 508 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 UBASH3BQ8TF42 649 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 PIGCQ92535 297 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 RPL3LQ92901 407 aaKnown RBP21.64■■□□□ 1.05
SSBP3-202ENST00000357475 SLC30A2Q9BRI3 323 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 PAPOLGQ9BWT3 736 aaKnown RBP21.64■■□□□ 1.05
SSBP3-202ENST00000357475 FGF23Q9GZV9 251 aaPredicted RBP21.64■■□□□ 1.05
SSBP3-202ENST00000357475 GPR173Q9NS66 373 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 LAMP3Q9UQV4 416 aa21.64■■□□□ 1.05
SSBP3-202ENST00000357475 TRBV5-7A0A0A0MS05 114 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 ZNF816-ZNF321PA0A0X1KG74 233 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 DHRS7CA6NNS2 312 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 ZNF850A8MQ14 1090 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 B9A039 149 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 DDOSTP39656 456 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 EVX1P49640 407 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 ZMAT1Q5H9K5 638 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 CEP78Q5JTW2 689 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 CD200R1LQ6Q8B3 271 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 CSNK2A3Q8NEV1 391 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 OR10AD1Q8NGE0 317 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 FUNDC2Q9BWH2 189 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 NAA50Q9GZZ1 169 aaKnown RBP21.63■■□□□ 1.05
SSBP3-202ENST00000357475 NOX4Q9NPH5 578 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 TAS2R4Q9NYW5 299 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 MRPL15Q9P015 296 aaKnown RBP21.63■■□□□ 1.05
SSBP3-202ENST00000357475 ENPP5Q9UJA9 477 aa21.63■■□□□ 1.05
SSBP3-202ENST00000357475 ANKRD30BLA7E2S9 258 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 CST4P01036 141 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 ZNF12P17014 697 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 ZNF20P17024 532 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 SSTR2P30874 369 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 PRDX4Q13162 271 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 TMEM42Q69YG0 159 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 DTX2Q86UW9 622 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 CCDC54Q8NEL0 328 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 TRAF4Q9BUZ4 470 aaPredicted RBP21.62■■□□□ 1.05
SSBP3-202ENST00000357475 RNF167Q9H6Y7 350 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 CBLN4Q9NTU7 201 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 CSMD2Q7Z408 3487 aa21.62■■□□□ 1.05
SSBP3-202ENST00000357475 TRAV8-7A0A075B6U6 113 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 GMDSO60547 372 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 UBE2V2Q15819 145 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 SPRNQ5BIV9 151 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 AGAP6Q5VW22 663 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 KRT74Q7RTS7 529 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 GPR141Q7Z602 305 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 PARP16Q8N5Y8 322 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 CHCHD6Q9BRQ6 235 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 TMEM100Q9NV29 134 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 STUB1Q9UNE7 303 aa21.61■■□□□ 1.05
SSBP3-202ENST00000357475 M0R233 179 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 SPRY3O43610 288 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 PSMA1P25786 263 aaKnown RBP21.6■■□□□ 1.05
SSBP3-202ENST00000357475 GNALP38405 381 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 TRAM1Q15629 374 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 ZBTB37Q5TC79 503 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 OR51A2Q8NGJ7 313 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 HPSE2Q8WWQ2 592 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 ADAT1Q9BUB4 502 aaKnown RBP21.6■■□□□ 1.05
SSBP3-202ENST00000357475 TPK1Q9H3S4 243 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 EXOSC4Q9NPD3 245 aaKnown RBP21.6■■□□□ 1.05
SSBP3-202ENST00000357475 FAIMQ9NVQ4 179 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 IGKV1-9A0A0C4DH69 117 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 TRDV1A0A1B0GX56 115 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 PLSCR5A0PG75 271 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 SERPINA3P01011 423 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 NRASP01111 189 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 TGFBR1P36897 503 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 ZNF81P51508 661 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 HNRNPA0Q13151 305 aaKnown RBP21.6■■□□□ 1.05
SSBP3-202ENST00000357475 CLVS2Q5SYC1 327 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 GPR107Q5VW38 600 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 C22orf42Q6IC83 251 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 MOB3CQ70IA8 216 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 OR2Z1Q8NG97 314 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 OR13C9Q8NGT0 318 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 NPRL2Q8WTW4 380 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 PIGTQ969N2 578 aa21.6■■□□□ 1.05
SSBP3-202ENST00000357475 CENPOQ9BU64 300 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms