RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 LRP12Q9Y561 859 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 MMP24Q9Y5R2 645 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 SPTY2D1-AS1A0A0U1RR47 76 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 SLC31A2O15432 143 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 OR6A2O95222 327 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 CLPSP04118 112 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 THEGLP0DJG4 465 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 OR13C7P0DN81 318 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 HIST1H1BP16401 226 aaKnown RBP16.55■□□□□ 0.24
SCARF1-202ENST00000348987 RPL12P30050 165 aaKnown RBP16.55■□□□□ 0.24
SCARF1-202ENST00000348987 CLDN6P56747 220 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 CLEC9AQ6UXN8 241 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 TGM7Q96PF1 710 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 MRPL22Q9NWU5 206 aaKnown RBP16.55■□□□□ 0.24
SCARF1-202ENST00000348987 HHLA2Q9UM44 414 aa16.55■□□□□ 0.24
SCARF1-202ENST00000348987 LOC390937A0A1W2PQ73 354 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 RABIFP47224 123 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 RAP1AP62834 184 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 IL15RAQ13261 267 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 TOMM34Q15785 309 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-202ENST00000348987 PDZD11Q5EBL8 140 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 EMC4Q5J8M3 183 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 ATG4DQ86TL0 474 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-202ENST00000348987 LYPD6Q86Y78 171 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 TMEM104Q8NE00 496 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 CCDC54Q8NEL0 328 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 MR1Q95460 341 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 PPP4R1LQ9P1A2 415 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 FBXO7Q9Y3I1 522 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 LOC107986453A0A1B0GWG9 222 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 JTBO76095 146 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 FCGR2CP31995 323 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 THBS4P35443 961 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 TMEM33P57088 247 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 TAS2R60P59551 318 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 IGLV3-21P80748 117 aaPredicted RBP16.54■□□□□ 0.24
SCARF1-202ENST00000348987 FUT7Q11130 342 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 POMZP3Q6PJE2 187 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 DTWD2Q8NBA8 298 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 GNRHR2Q96P88 292 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 NICN1Q9BSH3 213 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 TGIF2Q9GZN2 237 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 HDGFL3Q9Y3E1 203 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 HS3ST3A1Q9Y663 406 aa16.54■□□□□ 0.24
SCARF1-202ENST00000348987 RP1P56715 2156 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 A0A1B0GV50 99 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 K7EPK0 472 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 ZNF264O43296 627 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 GAMTQ14353 236 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 PRR22Q8IZ63 422 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 FAM71E2Q8N5Q1 922 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 UBAC2Q8NBM4 344 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 LIPHQ8WWY8 451 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 RTBDNQ9BSG5 229 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-202ENST00000348987 ABHD6Q9BV23 337 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 PRO1933Q9H354 126 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 KCNJ16Q9NPI9 418 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 PUS1Q9Y606 427 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCARF1-202ENST00000348987 MED19A0JLT2 244 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-202ENST00000348987 SHISA7A6NL88 538 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 C2CD4DB7Z1M9 353 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 SLC16A7O60669 478 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 VSIG8P0DPA2 414 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 ZNF708P17019 499 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 SURF2Q15527 256 aaPredicted RBP16.53■□□□□ 0.24
SCARF1-202ENST00000348987 SPNS3Q6ZMD2 512 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 REC114Q7Z4M0 266 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 OR52N4Q8NGI2 321 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 TAAR8Q969N4 342 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 C8orf44Q96CB5 159 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 YPEL4Q96NS1 127 aa16.53■□□□□ 0.24
SCARF1-202ENST00000348987 LOC101059948A0A1B0GTJ6 334 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 CLDN4O14493 209 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 XKRYO14609 159 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 MAS1LP35410 378 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 PPM1FP49593 454 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-202ENST00000348987 ZP2Q05996 745 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 RAB30Q15771 203 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 GFI1BQ5VTD9 330 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 C1QL3Q5VWW1 255 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 WBP2NLQ6ICG8 309 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 ZNF529Q6P280 563 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 KCTD18Q6PI47 426 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-202ENST00000348987 CPNE4Q96A23 557 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-202ENST00000348987 LRRC61Q9BV99 259 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 NXF5Q9H1B4 397 aaKnown RBP16.52■□□□□ 0.24
SCARF1-202ENST00000348987 PTGES2Q9H7Z7 377 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 FAM212BQ9NTI7 297 aaPredicted RBP16.52■□□□□ 0.24
SCARF1-202ENST00000348987 FRYLO94915 3013 aa16.52■□□□□ 0.24
SCARF1-202ENST00000348987 CDC14CA4D256 554 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 C1QL1O75973 258 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 GUSBP08236 651 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 PNMTP11086 282 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 HPGDP15428 266 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 TBPP20226 339 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 GLRA1P23415 457 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 FAM3AP98173 230 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 ROM1Q03395 351 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 RSU1Q15404 277 aa16.52■□□□□ 0.23
SCARF1-202ENST00000348987 SSX2Q16385 188 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms