RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 BCKDHBP21953 392 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 FOXF1Q12946 379 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 TUSC1Q2TAM9 212 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 OVCH2Q7RTZ1 564 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 MRGPRX4Q96LA9 322 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 CNTD2Q9H8S5 307 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 GHRLQ9UBU3 117 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 NOSIPQ9Y314 301 aaKnown RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 SFT2D2O95562 160 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 EPPINO95925 133 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 ABCD3P28288 659 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 EFNB2P52799 333 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 SUMF1Q8NBK3 374 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 KCNE4Q8WWG9 221 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 FN3KRPQ9HA64 309 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 LRP3O75074 770 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 CFDP00746 253 aaPredicted RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 S100A8P05109 93 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 PJVKQ0ZLH3 352 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 SRSF5Q13243 272 aaKnown RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 INPP5JQ15735 1006 aaPredicted RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 DPPA2Q7Z7J5 298 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 TMEM217Q8N7C4 229 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 ZNF485Q8NCK3 441 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 OR1N1Q8NGS0 311 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 OXGR1Q96P68 337 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 BCO1Q9HAY6 547 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 PURGQ9UJV8 347 aaKnown RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 NDUFA6P56556 154 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 RNF4P78317 190 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 DEGS2Q6QHC5 323 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 NAA40Q86UY6 237 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 NOXO1Q8NFA2 376 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 OR4D10Q8NGI6 311 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 SLC25A38Q96DW6 304 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 KLHDC2Q9Y2U9 406 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 FBXO7Q9Y3I1 522 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 NMBP08949 121 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 EIF2S3P41091 472 aaKnown RBP13.17□□□□□ -0.3
NUP50-201ENST00000347635 DEFA6Q01524 100 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 SKA3Q8IX90 412 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 GVQW1Q8N7I0 195 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 OR51A2Q8NGJ7 313 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 MUCL1Q96DR8 90 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 SEH1LQ96EE3 360 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 MALSU1Q96EH3 234 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 R4GN57 208 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 MFSD2BA6NFX1 497 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 A6NLC8 198 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 HIST1H1DP16402 221 aaKnown RBP13.17□□□□□ -0.3
NUP50-201ENST00000347635 PMS2CLQ68D20 193 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 PSMF1Q92530 271 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 RYDENQ9NUL5 291 aaKnown RBP13.17□□□□□ -0.3
NUP50-201ENST00000347635 MGAMO43451 1857 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 IGHV5-51A0A0C4DH38 117 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 LINC01387J3KSC0 135 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 PLPP3O14495 311 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 KLF4O43474 513 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 IGKV1D-16P01601 117 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 MAML2Q8IZL2 1156 aaPredicted RBP13.17□□□□□ -0.3
NUP50-201ENST00000347635 CNEP1R1Q8N9A8 125 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 OR1L3Q8NH93 324 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 TM4SF19Q96DZ7 209 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 OCSTAMPQ9BR26 566 aa13.17□□□□□ -0.3
NUP50-201ENST00000347635 ZNF107Q9UII5 783 aaPredicted RBP13.17□□□□□ -0.3
NUP50-201ENST00000347635 ALG1L2C9J202 215 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 OR2C1O95371 312 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 IFNA4P05014 189 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 IGHV4-34P06331 123 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 RPS4Y1P22090 263 aaKnown RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 RBP2P50120 134 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 IKZF1Q13422 519 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 KIAA0141Q14154 515 aaPredicted RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 RPUSD3Q6P087 351 aaKnown RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 GPX8Q8TED1 209 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 SERPINE3A8MV23 424 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 G3V3Y1 287 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 MPZL1O95297 269 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 ARGFXA6NJG6 315 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 CDAP32320 146 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 RAB13P51153 203 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 SKP2Q13309 424 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 CATSPERDQ86XM0 798 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 KISS1RQ969F8 398 aaPredicted RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 AKR1E2Q96JD6 320 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 IFT22Q9H7X7 185 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 HSPB6O14558 160 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 RECKO95980 971 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 THY1P04216 161 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 NKX2-1P43699 371 aaPredicted RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 TRIP6Q15654 476 aaKnown RBP13.16□□□□□ -0.3
NUP50-201ENST00000347635 ETFDHQ16134 617 aa13.16□□□□□ -0.3
NUP50-201ENST00000347635 ZNF561Q8N587 486 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms