RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 GDPD1Q8N9F7 314 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 OR4M1Q8NGD0 313 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 OR4D6Q8NGJ1 314 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 RAB40AQ8WXH6 277 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 SORCS2Q96PQ0 1159 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 NKX3-1Q99801 234 aaPredicted RBP9.48□□□□□ -0.89
ECM1-201ENST00000346569 CCDC32Q9BV29 185 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 POFUT1Q9H488 388 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 METTL17Q9H7H0 456 aaPredicted RBP9.48□□□□□ -0.89
ECM1-201ENST00000346569 CNTD2Q9H8S5 307 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 EXTL2Q9UBQ6 330 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 AMDHD2Q9Y303 409 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 MEMO1Q9Y316 297 aa9.48□□□□□ -0.89
ECM1-201ENST00000346569 SHANK1Q9Y566 2161 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 RP1L1Q8IWN7 2480 aaPredicted RBP9.47□□□□□ -0.89
ECM1-201ENST00000346569 PRR14LQ5THK1 2151 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 HOXC12P31275 282 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 ZNF93P35789 620 aaPredicted RBP9.47□□□□□ -0.89
ECM1-201ENST00000346569 POU3F4P49335 361 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 IDH3GP51553 393 aaPredicted RBP9.47□□□□□ -0.89
ECM1-201ENST00000346569 QRFPP83859 136 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 MALLQ13021 153 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 BAK1Q16611 211 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 ZNF181Q2M3W8 571 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 UBE2NLQ5JXB2 153 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 CLVS2Q5SYC1 327 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 FBXW12Q6X9E4 464 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 BIVMQ86UB2 503 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 LYSMD2Q8IV50 215 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 JAGN1Q8N5M9 183 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 RELL2Q8NC24 303 aaPredicted RBP9.47□□□□□ -0.89
ECM1-201ENST00000346569 OR5L1Q8NGL2 311 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 SYNPRQ8TBG9 265 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 RND1Q92730 232 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 HAVCR1Q96D42 359 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 ABHD1Q96SE0 405 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 C1QTNF6Q9BXI9 259 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 OPA3Q9H6K4 179 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 PLEKHA1Q9HB21 404 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 ELOVL5Q9NYP7 299 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 SH3BGRL2Q9UJC5 107 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 ZNF462Q96JM2 2506 aa9.47□□□□□ -0.89
ECM1-201ENST00000346569 SPTA1P02549 2419 aa9.46□□□□□ -0.89
ECM1-201ENST00000346569 IGHV1-18A0A0C4DH31 117 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 ZNF816-ZNF321PA0A0X1KG74 233 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 LOC100289279A0A1B0GTE1 492 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 TMEM272A0A1B0GTI8 110 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 TPPPO94811 219 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 NRASP01111 189 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 NAT2P11245 290 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 IL32P24001 234 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 ALDH3B1P43353 468 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 CAPZA1P52907 286 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 ART1P52961 327 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 UCP2P55851 309 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 PRSS12P56730 875 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 MRPL49Q13405 166 aaKnown RBP9.46□□□□□ -0.9
ECM1-201ENST00000346569 HLXQ14774 488 aaPredicted RBP9.46□□□□□ -0.9
ECM1-201ENST00000346569 C22orf34Q6ZV56 151 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 ANGPTL5Q86XS5 388 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 STEAP2Q8NFT2 490 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 UBASH3BQ8TF42 649 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 PTX4Q96A99 478 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 S100PBPQ96BU1 408 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 C1orf147Q96MC9 270 aaPredicted RBP9.46□□□□□ -0.9
ECM1-201ENST00000346569 SPACA5Q96QH8 159 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 USB1Q9BQ65 265 aaKnown RBP9.46□□□□□ -0.9
ECM1-201ENST00000346569 CDH20Q9HBT6 801 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 MOV10Q9HCE1 1003 aaKnown RBP9.46□□□□□ -0.9
ECM1-201ENST00000346569 RHBDL2Q9NX52 303 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 PTTG3PQ9NZH4 202 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 FBLN5Q9UBX5 448 aa9.46□□□□□ -0.9
ECM1-201ENST00000346569 TRGV8A0A0C4DH27 118 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 A0A0G2JMP0 313 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 A0A0X1KG70 313 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 ISPDA4D126 451 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 CD300LBA8K4G0 201 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 MAGEB3O15480 346 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 SMPD2O60906 423 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 CST4P01036 141 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 HLA-DQB1P01920 261 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 PRB1P04280 392 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 CSF3P09919 207 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 CECR9P0C854 216 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 ARSBP15848 533 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 TUBG1P23258 451 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 AZGP1P25311 298 aaKnown RBP9.45□□□□□ -0.9
ECM1-201ENST00000346569 TALDO1P37837 337 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 MNDAP41218 407 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 NR4A2P43354 598 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 RANBP1P43487 201 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 PITPNBP48739 271 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 EFNB2P52799 333 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 IL18Q14116 193 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 KISS1Q15726 138 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 TAB1Q15750 504 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 DMRTC1Q5HYR2 192 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 STEAP3Q658P3 488 aa9.45□□□□□ -0.9
ECM1-201ENST00000346569 PYHIN1Q6K0P9 492 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms