RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 KRTAP27-1Q3LI81 207 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CCDC157Q569K6 752 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ACER2Q5QJU3 275 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ABLIM2Q6H8Q1 611 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CHST4Q8NCG5 386 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 GJC3Q8NFK1 279 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SF3B5Q9BWJ5 86 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 BANF2Q9H503 90 aa11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 FARSAQ9Y285 508 aaKnown RBP11.37□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CCDC187A0A096LP49 1063 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 HMSDA8MTL9 139 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 F5H5K5 113 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 MFNGO00587 321 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 TERTO14746 1132 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 MPIG6BO95866 241 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 NR2C1P13056 603 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 HIST1H1DP16402 221 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 TCN2P20062 427 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 HRH1P35367 487 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 STARP49675 285 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SEC61A1P61619 476 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 MRPS34P82930 218 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 MEF2DQ14814 521 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SNAI3Q3KNW1 292 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SFRP5Q5T4F7 317 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 FAM27BQ5VT28 67 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CHMP1BQ7LBR1 199 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 TMED4Q7Z7H5 227 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CD163Q86VB7 1156 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 OR8H3Q8N146 312 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 PGAM5Q96HS1 289 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SFXN2Q96NB2 322 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 RBM24Q9BX46 236 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ULBP2Q9BZM5 246 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CST11Q9H112 138 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 P4HTMQ9NXG6 502 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 FOXJ2Q9P0K8 574 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ZNF230Q9UIE0 474 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CACNA1AO00555 2505 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 M0R233 179 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 NOS1APO75052 506 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 IL2RAP01589 272 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SERPINA7P05543 415 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 LIPCP11150 499 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 FAHP16930 419 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 POU3F2P20265 443 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 NFYAP23511 347 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 THBS4P35443 961 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ALDH3B1P43353 468 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 P2RX3P56373 397 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SRSF4Q08170 494 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 EIF3IQ13347 325 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SSPNQ14714 243 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 HLXQ14774 488 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ESCO2Q56NI9 601 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 RNASE10Q5GAN6 216 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CLLU1Q5K131 121 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SLC25A42Q86VD7 318 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 FAM89BQ8N5H3 189 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 C12orf45Q8N5I9 185 aaPredicted RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 TNFAIP8L1Q8WVP5 186 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 INTS12Q96CB8 462 aaKnown RBP11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 DCAF16Q9NXF7 216 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 UPB1Q9UBR1 384 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 PCDHGA1Q9Y5H4 931 aa11.36□□□□□ -0.59
CDK5RAP1-201ENST00000339269 AHCTF1Q8WYP5 2266 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 M0R135 149 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SYNGR3O43761 229 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CXCL13O43927 109 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 DHRS3O75911 302 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SCGNO76038 276 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 RGS11O94810 467 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 P04436 131 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CHRM2P08172 466 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 GFRA1P56159 465 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CXADRP78310 365 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ECH1Q13011 328 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SCGB2B2Q4G0G5 96 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 NHLRC3Q5JS37 347 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 WIPI1Q5MNZ9 446 aaPredicted RBP11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 RAB11FIP2Q7L804 512 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ZNF101Q8IZC7 436 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ADAD2Q8NCV1 583 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 KCNG3Q8TAE7 436 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 SUN5Q8TC36 379 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CCDC107Q8WV48 283 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ROBO4Q8WZ75 1007 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 ZNF799Q96GE5 643 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 CHST5Q9GZS9 411 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 DOCK10Q96BY6 2186 aa11.35□□□□□ -0.59
CDK5RAP1-201ENST00000339269 DISC1C4P0D8 188 aa11.34□□□□□ -0.59
CDK5RAP1-201ENST00000339269 MSTNO14793 375 aa11.34□□□□□ -0.59
CDK5RAP1-201ENST00000339269 F10P00742 488 aa11.34□□□□□ -0.59
CDK5RAP1-201ENST00000339269 HCKP08631 526 aa11.34□□□□□ -0.59
CDK5RAP1-201ENST00000339269 GSTP1P09211 210 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP1-201ENST00000339269 FTH1P19P0C7X4 201 aa11.34□□□□□ -0.59
CDK5RAP1-201ENST00000339269 PPP3CBP16298 524 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms