RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 OPA3Q9H6K4 179 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 DUSP13Q9UII6 198 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 POU2F3Q9UKI9 436 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 PTPN13Q12923 2485 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 APCP25054 2843 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 TRAV8-7A0A075B6U6 113 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 A0A1B0GVI7 797 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 TRDV1A0A1B0GX56 115 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 A0A1W2PPK0 400 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 GABRPO00591 440 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 GMDSO60547 372 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 UCHL1P09936 223 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 CD37P11049 281 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 CFL1P23528 166 aaKnown RBP8.08□□□□□ -1.12
RFX3-201ENST00000302303 RBMXP38159 391 aaKnown RBP8.08□□□□□ -1.12
RFX3-201ENST00000302303 DDOSTP39656 456 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 ALDH3B1P43353 468 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 MAP2K3P46734 347 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 KLF3P57682 345 aaPredicted RBP8.08□□□□□ -1.12
RFX3-201ENST00000302303 RPS23P62266 143 aaKnown RBP8.08□□□□□ -1.12
RFX3-201ENST00000302303 Q499Y3 187 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 ZMAT1Q5H9K5 638 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 WDR86Q86TI4 376 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 SATL1Q86VE3 508 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 MUC15Q8N387 334 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 BHLHE23Q8NDY6 225 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 SEMA6DQ8NFY4 1073 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 HPSE2Q8WWQ2 592 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 NRGNQ92686 78 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 ITFG2Q969R8 447 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 FBXW5Q969U6 566 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 MARVELD3Q96A59 401 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 TRAF4Q9BUZ4 470 aaPredicted RBP8.08□□□□□ -1.12
RFX3-201ENST00000302303 FUNDC2Q9BWH2 189 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 RBM38Q9H0Z9 239 aaKnown RBP8.08□□□□□ -1.12
RFX3-201ENST00000302303 RNF167Q9H6Y7 350 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 MSL2Q9HCI7 577 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 NOX4Q9NPH5 578 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 TAAR3PQ9P1P4 343 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 SCOCQ9UIL1 159 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 PIGLQ9Y2B2 252 aa8.08□□□□□ -1.12
RFX3-201ENST00000302303 ARFGEF3Q5TH69 2177 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 LOC100289279A0A1B0GTE1 492 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 GGT3PA6NGU5 568 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 B9A039 149 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 OVOL3O00110 214 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 MTRF1O75570 445 aaKnown RBP8.07□□□□□ -1.12
RFX3-201ENST00000302303 HLA-DPB1P04440 258 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 ADH4P08319 380 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 OCM2P0CE71 109 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 ADRA2CP18825 462 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 GALP22466 123 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 CA6P23280 308 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 GCH1P30793 250 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 FGF9P31371 208 aaPredicted RBP8.07□□□□□ -1.12
RFX3-201ENST00000302303 TGFBR1P36897 503 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 RIPPLY1Q0D2K3 151 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 HNRNPA0Q13151 305 aaKnown RBP8.07□□□□□ -1.12
RFX3-201ENST00000302303 MAB21L1Q13394 359 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 CTF1Q16619 201 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 ZBTB37Q5TC79 503 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 CCDC54Q8NEL0 328 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 OR51A2Q8NGJ7 313 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 OR13C3Q8NGS6 347 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 DVL3Q92997 716 aaPredicted RBP8.07□□□□□ -1.12
RFX3-201ENST00000302303 TMEM106AQ96A25 262 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 C10orf35Q96D05 121 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 ITPKCQ96DU7 683 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 GFI1Q99684 422 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 CENPOQ9BU64 300 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 CHST5Q9GZS9 411 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 TXNL4BQ9NX01 149 aaKnown RBP8.07□□□□□ -1.12
RFX3-201ENST00000302303 MRPL15Q9P015 296 aaKnown RBP8.07□□□□□ -1.12
RFX3-201ENST00000302303 GPR160Q9UJ42 338 aa8.07□□□□□ -1.12
RFX3-201ENST00000302303 IGKV1-27A0A075B6S5 117 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 ZNF816-ZNF321PA0A0X1KG74 233 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 ZNF850A8MQ14 1090 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 TIMM8AO60220 97 aaPredicted RBP8.06□□□□□ -1.12
RFX3-201ENST00000302303 GATBO75879 557 aaKnown RBP8.06□□□□□ -1.12
RFX3-201ENST00000302303 ALX3O95076 343 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 PTBP3O95758 552 aaKnown RBP8.06□□□□□ -1.12
RFX3-201ENST00000302303 IGHV1-46P01743 117 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 NAT2P11245 290 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 SELEP16581 610 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 ZNF12P17014 697 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 THBS2P35442 1172 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 PRDX4Q13162 271 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 TRAM1Q15629 374 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 FAM76BQ5HYJ3 339 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 CEP78Q5JTW2 689 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 UTS2BQ765I0 119 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 CEACAM19Q7Z692 300 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 LRRTM1Q86UE6 522 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 NR2C2APQ86WQ0 139 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 COMMD2Q86X83 199 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 ANKRD13BQ86YJ7 626 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 SERPINA12Q8IW75 414 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 CSNK2A3Q8NEV1 391 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 OR5P3Q8WZ94 311 aa8.06□□□□□ -1.12
RFX3-201ENST00000302303 PIGCQ92535 297 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms