RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 IL20Q9NYY1 176 aa7.34□□□□□ -1.23
TPM3-201ENST00000271850 KCNG2Q9UJ96 466 aa7.34□□□□□ -1.23
TPM3-201ENST00000271850 CDH10Q9Y6N8 788 aa7.34□□□□□ -1.23
TPM3-201ENST00000271850 DHRS12A0PJE2 317 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 GGT3PA6NGU5 568 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 IDH3BO43837 385 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 CCDC22O60826 627 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 GASTP01350 101 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 LIPFP07098 398 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 SPI1P17947 270 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 ATP6V1B2P21281 511 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 ACKR3P25106 362 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 MAGEA2P43356 314 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 TGM4P49221 684 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 HMGA2P52926 109 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 PSMA6P60900 246 aaKnown RBP7.33□□□□□ -1.24
TPM3-201ENST00000271850 RPL15P61313 204 aaKnown RBP7.33□□□□□ -1.24
TPM3-201ENST00000271850 MXRA7P84157 204 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 PDCD1Q15116 288 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 CDONQ4KMG0 1287 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 STUMQ69YW2 141 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 METAP1DQ6UB28 335 aaPredicted RBP7.33□□□□□ -1.24
TPM3-201ENST00000271850 PNLDC1Q8NA58 520 aaKnown RBP7.33□□□□□ -1.24
TPM3-201ENST00000271850 PROKR2Q8NFJ6 384 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 OR1M1Q8NGA1 313 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 GNPDA2Q8TDQ7 276 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 LRRC29Q8WV35 223 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 HPSE2Q8WWQ2 592 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 ST8SIA4Q92187 359 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 SPTSSAQ969W0 71 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 CCT8L2Q96SF2 557 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 KCNJ15Q99712 375 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 COPS4Q9BT78 406 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 WDR13Q9H1Z4 485 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 C16orf95Q9H693 158 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 CNTD2Q9H8S5 307 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 KRCC1Q9NPI7 259 aaPredicted RBP7.33□□□□□ -1.24
TPM3-201ENST00000271850 ARMC1Q9NVT9 282 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 DNAJB11Q9UBS4 358 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 N6AMT1Q9Y5N5 214 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 KPTNQ9Y664 436 aa7.33□□□□□ -1.24
TPM3-201ENST00000271850 A0A1W2PRD5 423 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 A0A1W2PRF3 423 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 A0A1W2PRM7 423 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 hCG_1807616A0A1W2PRN6 198 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 TCRBV5S2A0A599 114 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 SLC22A31A6NKX4 558 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 A6NLC8 198 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 ZNF593O00488 134 aaPredicted RBP7.32□□□□□ -1.24
TPM3-201ENST00000271850 CDIPTO14735 213 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 NDUFA2O43678 99 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 TSPAN9O75954 239 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 FABP3P05413 133 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 CRYBA1P05813 215 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 SPARCP09486 303 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 ZNF823P16415 610 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 PAX6P26367 422 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 PRDX6P30041 224 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 CX3CR1P49238 355 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 ENTPD1P49961 510 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 KRT72Q14CN4 511 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 DGUOKQ16854 277 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 TEX30Q5JUR7 227 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 CRIP3Q6Q6R5 217 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 RASSF6Q6ZTQ3 369 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 OR5T2Q8NGG2 359 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 OR2T4Q8NH00 348 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 C8orf46Q8TAG6 207 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 PPP1R35Q8TAP8 253 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 LYZL4Q96KX0 146 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 GAFA1Q96PS6 74 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 ELAC2Q9BQ52 826 aaKnown RBP7.32□□□□□ -1.24
TPM3-201ENST00000271850 DCTN5Q9BTE1 182 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 TRIM15Q9C019 465 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 NSRP1Q9H0G5 558 aaKnown RBP7.32□□□□□ -1.24
TPM3-201ENST00000271850 MED20Q9H944 212 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 RNPEPL1Q9HAU8 725 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 SNTG1Q9NSN8 517 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 CENPMQ9NSP4 180 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 ARGLU1Q9NWB6 273 aaPredicted RBP7.32□□□□□ -1.24
TPM3-201ENST00000271850 MAGEL2Q9UJ55 1249 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 PRPF19Q9UMS4 504 aaKnown RBP7.32□□□□□ -1.24
TPM3-201ENST00000271850 SIGLEC9Q9Y336 463 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 RHBDD3Q9Y3P4 386 aa7.32□□□□□ -1.24
TPM3-201ENST00000271850 A0A1B0GVI7 797 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 FAM183AA6NL82 134 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 ZNF878C9JN71 531 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 G3V4G9 280 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 M0QZ24 198 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 NDUFAB1O14561 156 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 GSC2O15499 205 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 XRCC2O43543 280 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 SOX14O95416 240 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 MUC1P15941 1255 aaPredicted RBP7.31□□□□□ -1.24
TPM3-201ENST00000271850 DCTDP32321 178 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 OPRL1P41146 370 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 SLC25A1P53007 311 aa7.31□□□□□ -1.24
TPM3-201ENST00000271850 GP2P55259 537 aaKnown RBP7.31□□□□□ -1.24
TPM3-201ENST00000271850 ZNF121P58317 390 aaPredicted RBP7.31□□□□□ -1.24
TPM3-201ENST00000271850 SMIM11AP58511 58 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms