RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 CDCA3Q99618 268 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 TWSG1Q9GZX9 223 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 PLEKHA2Q9HB19 425 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 EMC9Q9Y3B6 208 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 LRP12Q9Y561 859 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 TMEM269A0A1B0GVZ9 245 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 A0A1B0GW64 132 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 FAM221BA6H8Z2 402 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 TLCD2A6NGC4 264 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 FIGNL2A6NMB9 653 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 CEACAM18A8MTB9 384 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF705GA8MUZ8 300 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 H0YL77 283 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 DVL1O14640 695 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 GPR75O95800 540 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 VSIG8P0DPA2 414 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 KLK2P20151 261 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 RBMXP38159 391 aaKnown RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 GNALP38405 381 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 OR3A2P47893 321 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 PSG6Q00889 435 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 TMEM182Q6ZP80 229 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 LANCL3Q6ZV70 420 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 C5orf24Q7Z6I8 188 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF429Q86V71 674 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 TMEM156Q8N614 296 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 HSD17B11Q8NBQ5 300 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 TMEM52Q8NDY8 209 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 FNDC9Q8TBE3 224 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 BSCL2Q96G97 398 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SNX22Q96L94 193 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 GINS3Q9BRX5 216 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SMDT1Q9H4I9 107 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 MMP25Q9NPA2 562 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 C1orf123Q9NWV4 160 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 RBFOX3A6NFN3 312 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 XKRYO14609 159 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 HSD17B6O14756 317 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 SOX15O60248 233 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 KAT7O95251 611 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 APLNRP35414 380 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 CD200P41217 278 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 P2RY1P47900 373 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 EMP2P54851 167 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 BTG2P78543 158 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 ZP2Q05996 745 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 MGAT2Q10469 447 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 PEG10Q86TG7 708 aaKnown RBP6.42□□□□□ -1.38
CSDE1-201ENST00000261443 PLPP5Q8NEB5 264 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 METTL21AQ8WXB1 218 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 FAM210BQ96KR6 192 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 NICN1Q9BSH3 213 aa6.42□□□□□ -1.38
CSDE1-201ENST00000261443 CCDC187A0A096LP49 1063 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 A0A1W2PQ45 241 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-201ENST00000261443 A0A1W2PQY0 241 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 SDCBPO00560 298 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-201ENST00000261443 BPNT1O95861 308 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 IFNA21P01568 189 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 ASAH2BP0C7U1 165 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 OR5H8P0DN80 308 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 GLIPR1P48060 266 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 CCR4P51679 360 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 ROM1Q03395 351 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF141Q15928 474 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 NNATQ16517 81 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 HAGHQ16775 308 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 ANKRD39Q53RE8 183 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 LYPD6Q86Y78 171 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 GATSQ8NAP1 163 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 APCDD1LQ8NCL9 501 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 OR52N4Q8NGI2 321 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 OR13G1Q8NGZ3 307 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 NT5CQ8TCD5 201 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 HPSE2Q8WWQ2 592 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 FGGYQ96C11 551 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 DNAJA3Q96EY1 480 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 ABHD6Q9BV23 337 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 WFDC1Q9HC57 220 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 LRIT1Q9P2V4 623 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 PITPNC1Q9UKF7 332 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 RHBDD3Q9Y3P4 386 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 MMACHCQ9Y4U1 282 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 WNT6Q9Y6F9 365 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 SPACA6W5XKT8 324 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 TRANK1O15050 2925 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 LTBP2Q14767 1821 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 SERINC4A6NH21 518 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 C11orf98E9PRG8 122 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 K7EQS6 105 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 SLC16A7O60669 478 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 CTSVO60911 334 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 PGA4P0DJD7 388 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 PGA5P0DJD9 388 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 PNMTP11086 282 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 RPS2P15880 293 aaKnown RBP6.41□□□□□ -1.38
CSDE1-201ENST00000261443 SELPP16109 830 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 CEBPBP17676 345 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 AMY2BP19961 511 aa6.41□□□□□ -1.38
CSDE1-201ENST00000261443 ZNF10P21506 573 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-201ENST00000261443 LMO1P25800 156 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms