RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ZNF775Q96BV0 537 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 SLC25A44Q96H78 314 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 NECAB3Q96P71 396 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 RTN4RQ9BZR6 473 aa9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 ATXN7L1Q9ULK2 861 aaPredicted RBP9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 SLC22A13Q9Y226 551 aa9.59□□□□□ -0.87
CHRNA1-201ENST00000261007 RANBP2P49792 3224 aaKnown RBP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 IGHV5-10-1A0A0J9YXX1 117 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 A0A1W2PPE3 182 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 H3BSH0 61 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 SFT2D2O95562 160 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 PNPP00491 289 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 ISG15P05161 165 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 MYF5P13349 255 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 RAB5AP20339 215 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 CRABP1P29762 137 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 CD80P33681 288 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 DNASE1L1P49184 302 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 RAB5CP51148 216 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 RIDAP52758 137 aaKnown RBP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 ZP4Q12836 540 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 TRA2AQ13595 282 aaKnown RBP eCLIP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 DNM1P34Q6PK57 102 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 LRRC69Q6ZNQ3 347 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 KDM8Q8N371 416 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 RNF138Q8WVD3 245 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 SCGB3A2Q96PL1 93 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 ZMAT3Q9HA38 289 aaKnown RBP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 TAF9BQ9HBM6 251 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 VSX1Q9NZR4 365 aaPredicted RBP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 CGGBP1Q9UFW8 167 aaPredicted RBP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 HHLA2Q9UM44 414 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 GTF2A1LQ9UNN4 478 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 RHBDD3Q9Y3P4 386 aa9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 TNRC6BQ9UPQ9 1833 aaKnown RBP9.58□□□□□ -0.88
CHRNA1-201ENST00000261007 UNC13CQ8NB66 2214 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 LY6G6EA0A0G2JKS1 128 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 A0A1W2PQM1 296 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 PRSS37A4D1T9 235 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 WIPF3A6NGB9 483 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 MSGN1A6NI15 193 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 LRP3O75074 770 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ZFAND5O76080 213 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 CST4P01036 141 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ACKR3P25106 362 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 LAP3P28838 519 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 HRH1P35367 487 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 HTR5AP47898 357 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 RAB2AP61019 212 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 IL11RAQ14626 422 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 TOMM34Q15785 309 aaPredicted RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 HLA-BQ31612 363 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ACTBL2Q562R1 376 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ACER2Q5QJU3 275 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 PEAR1Q5VY43 1037 aaPredicted RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ZNF385CQ66K41 422 aaPredicted RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 OR52W1Q6IF63 320 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 CPEB2Q7Z5Q1 589 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 TERB2Q8NHR7 220 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 MFSD8Q8NHS3 518 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ZNF519Q8TB69 540 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 C2orf50Q96LR7 162 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 CCDC74BQ96LY2 380 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 OPA3Q9H6K4 179 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 FN3KRPQ9HA64 309 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 TREM2Q9NZC2 230 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 GPR132Q9UNW8 380 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 B9D1Q9UPM9 204 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 U3KQA8 63 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 MPDZO75970 2070 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 LOC100509620A0A075B734 347 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 DCDC2BA2VCK2 349 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 C7orf77A4D0Y5 90 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 C9JQL5 133 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 H7C1C5 153 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ETV2O00321 342 aaPredicted RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 SOX1O00570 391 aaPredicted RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 PLPP3O14495 311 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 TXNL1O43396 289 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 PPIHO43447 177 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 GAPDHP04406 335 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 FGF5P12034 268 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 RPS27P42677 84 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 DAP3P51398 398 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 UCP2P55851 309 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 LCN6P62502 163 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 RAB1AP62820 205 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 IL15RAQ13261 267 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 EIF2B1Q14232 305 aaKnown RBP9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 TMEM268Q5VZI3 342 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 JAGN1Q8N5M9 183 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 ACBD4Q8NC06 268 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 C8orf44Q96CB5 159 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 SLC25A36Q96CQ1 311 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 DDIT4LQ96D03 193 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 AKR1E2Q96JD6 320 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 GAL3ST1Q99999 423 aa9.57□□□□□ -0.88
CHRNA1-201ENST00000261007 WDR54Q9H977 334 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms