RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SFTPBP07988 381 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 AKR1C3P42330 323 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 CAPZBP47756 277 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 CLDN6P56747 220 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 FOXL2P58012 376 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 RAB2AP61019 212 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MST1LQ2TV78 715 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 GALNTL5Q7Z4T8 443 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 C11orf40Q8WZ69 217 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 RAB3CQ96E17 227 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 GPER1Q99527 375 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 NRIP2Q9BQI9 281 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ST6GALNAC5Q9BVH7 336 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 SEC11CQ9BY50 192 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 SEC61A2Q9H9S3 476 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 CRLF2Q9HC73 371 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 CUTCQ9NTM9 273 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 DZANK1Q9NVP4 752 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 LPAR3Q9UBY5 353 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 FLVCR1Q9Y5Y0 555 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MS4A18H0YCH9 400 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 H3BML4 177 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 TSPAN2O60636 221 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 LRP3O75074 770 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MED6O75586 246 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MBP02144 154 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MPZP25189 248 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 GALNSP34059 522 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 QRFPP83859 136 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 NAAAQ02083 359 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MS4A18Q3C1V0 323 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 SHISA6Q6ZSJ9 500 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 SLC29A4Q7RTT9 530 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 THAP3Q8WTV1 239 aaPredicted RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ASB10Q8WXI3 467 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 TMEM230Q96A57 120 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 OR10C1Q96KK4 312 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MRPS28Q9Y2Q9 187 aaKnown RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 RTTNQ86VV8 2226 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 A0A0A6YYD4 124 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 SHISA8B8ZZ34 492 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MBTPS2O43462 519 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 SFT2D2O95562 160 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 OPN1LWP04000 364 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 HCKP08631 526 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 RCC1P18754 421 aaPredicted RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ID4P47928 161 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 TLE3Q04726 772 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 PEA15Q15121 130 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ELAVL1Q15717 326 aaKnown RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ANKRD55Q3KP44 614 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 RPL7L1Q6DKI1 246 aaKnown RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 PRSS54Q6PEW0 395 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 DEFB119Q8N690 84 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 FAM71F1Q96KD3 344 aaPredicted RBP9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 WWTR1Q9GZV5 400 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 LPAR5Q9H1C0 372 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 WNT5BQ9H1J7 359 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ACKR4Q9NPB9 350 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 FAM206AQ9NX38 181 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 TREM2Q9NZC2 230 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 COPS7AQ9UBW8 275 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 GPR132Q9UNW8 380 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 ZDBF2Q9HCK1 2354 aa9.33□□□□□ -0.92
CX3CL1-201ENST00000006053 MEX3AA1L020 520 aaKnown RBP9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 A6NIZ1 184 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 COL4A2P08572 1712 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 NQO2P16083 231 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 AMY2BP19961 511 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 CD80P33681 288 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 OR3A4PP47883 348 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 OR3A2P47893 321 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 GABRA4P48169 554 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 MMP16P51512 607 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 EFNA3P52797 238 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 RAP1BP61224 184 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 RAP1AP62834 184 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 PLAC9Q5JTB6 97 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 C1orf189Q5VU69 101 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 IL34Q6ZMJ4 242 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 ETV3LQ6ZN32 361 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 ABHD12BQ7Z5M8 362 aaPredicted RBP9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 TGIF2LXQ8IUE1 241 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 OR5H2Q8NGV7 314 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 RNF133Q8WVZ7 376 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 TCTEX1D2Q8WW35 142 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 CDC6Q99741 560 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 RSRP1Q9BUV0 290 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 PARP12Q9H0J9 701 aaKnown RBP9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 PISDQ9UG56 409 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 TRBV6-7A0A0A0MS04 114 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 CXorf65A6NEN9 183 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 RNASEK-C17orf49H0YIS7 233 aa9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
CX3CL1-201ENST00000006053 KNG1P01042 644 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms