RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Tnfsfm13Q8BXS2 410 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 RbksQ8R1Q9 323 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Abhd6Q8R2Y0 336 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 CdiptQ8VDP6 213 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Olfr800Q8VFH7 311 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Olfr648Q8VG19 316 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Cdhr5Q8VHF2 831 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Asb15Q8VHS6 583 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Marc2Q922Q1 338 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Mettl18Q9CZ09 362 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Cysrt1Q9D1E4 142 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Krt81Q9ERE2 481 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Tnfrsf19Q9JLL3 416 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Serinc3Q9QZI9 472 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 MvkQ9R008 395 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Mapk7Q9WVS8 806 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Rspo1Q9Z132 265 aa12.84□□□□□ -0.35
Ercc1-201ENSMUST00000003645 Igkv14-111A0A140T8P9 117 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm13083A2AGW5 501 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm14409A2ARR8 349 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr110A2RT31 317 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm15091B1AZM2 449 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Nsun4C4P6S0 806 aaKnown RBP12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 C2cd4aE9Q861 334 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Yjefn3F6W8I0 251 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm10428J3QNV7 132 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm6614M0QWR8 670 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Hps1O08983 704 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 TpbpaP13438 124 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 RpsaP14206 295 aaKnown RBP12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 CpeQ00493 476 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Opa3Q505D7 179 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr111Q7TRK1 317 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr285Q7TS17 319 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 H2-M10.4Q85ZW8 331 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 St7lQ8K4P7 559 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Naa40Q8VE10 237 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr493Q8VEW5 314 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr1226Q8VGM5 310 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Hspb2Q99PR8 182 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Serpinb11Q9CQV3 388 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Dimt1Q9D0D4 313 aaKnown RBP12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Vmn1r56Q9EPS9 310 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Srsf10Q9R0U0 262 aaKnown RBP12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Akap9Q70FJ1 3797 aa12.83□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Tln1P26039 2541 aaKnown RBP12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Vmn1r82A0A087WRV1 305 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Igkv5-37A0A140T8N4 115 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr1224-ps1A3KGY4 311 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Sac3d1A6H687 427 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Scml2B1AVB3 969 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm12830F6XVH0 157 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Matn3O35701 481 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 PpibP24369 216 aaKnown RBP12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gpm6aP35802 278 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Sf3b6P59708 125 aaKnown RBP12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 NrgnP60761 78 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Itgb8Q0VBD0 767 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Olfr1136Q0VBI4 310 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Spc25Q3UA16 226 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm4951Q3UED7 406 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Ankrd27Q3UMR0 1048 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Macrod2Q3UYG8 475 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Tmprss12Q3V0Q7 336 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Zp3rQ60736 579 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Rab35Q6PHN9 201 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Dact2Q7TN08 757 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Hapln4Q80WM4 400 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Zfp418Q8BFS8 652 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Acp6Q8BP40 418 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Exosc6Q8BTW3 273 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Tmcc3Q8R310 477 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Mterf3Q8R3J4 412 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Abhd17cQ8VCV1 320 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Pafah2Q8VDG7 390 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Spef1Q99JL1 234 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 PccbQ99MN9 541 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Washc3Q9CR27 194 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Q9CRW3 126 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 D10Wsu102eQ9CX66 185 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Pga5Q9D106 387 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 CstadQ9D245 104 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Prss8Q9ESD1 342 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Slc15a1Q9JIP7 709 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Uts2Q9QZQ3 123 aa12.82□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gm44G3UW88 330 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 SparcP07214 302 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Itgb2P11835 771 aaKnown RBP12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Cbr1P48758 277 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 StsP50427 624 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Lad1P57016 528 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 HfeP70387 359 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Q3U1D9 316 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Cln5Q3UMW8 341 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Rasl10bQ5SSG5 203 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Klf3Q60980 344 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Polr2mQ6P6I6 366 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Rab9bQ8BHH2 201 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Plac9Q8K262 108 aa12.81□□□□□ -0.36
Ercc1-201ENSMUST00000003645 Gpat4Q8K2C8 456 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms