RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA6	YLR447C	USV1	Q12132	391 aa		4.88	□□□□□ -1.63
VMA6	YLR447C	HOM2	P13663	365 aa	Known RBP	4.87	□□□□□ -1.63
VMA6	YLR447C	THR1	P17423	357 aa	Known RBP	4.87	□□□□□ -1.63
VMA6	YLR447C	VPS34	P22543	875 aa		4.87	□□□□□ -1.63
VMA6	YLR447C	KCC4	P25389	1037 aa		4.87	□□□□□ -1.63
VMA6	YLR447C	GLO1	P50107	326 aa		4.87	□□□□□ -1.63
VMA6	YLR447C	SEC5	P89102	971 aa		4.87	□□□□□ -1.63
VMA6	YLR447C	CIT2	P08679	460 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	ABF1	P14164	731 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	PEX1	P24004	1043 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	FUB1	P25659	250 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	MUP3	P38734	546 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	MRK1	P50873	501 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	NHX1	Q04121	633 aa		4.86	□□□□□ -1.63
VMA6	YLR447C	RPA135	P22138	1203 aa	Known RBP	4.85	□□□□□ -1.63
VMA6	YLR447C	SRP40	P32583	406 aa	Predicted RBP	4.85	□□□□□ -1.63
VMA6	YLR447C	GET2	P40056	285 aa		4.85	□□□□□ -1.63
VMA6	YLR447C	PCL10	P53124	433 aa		4.85	□□□□□ -1.63
VMA6	YLR447C	MDM12	Q92328	271 aa		4.85	□□□□□ -1.63
VMA6	YLR447C	CDC9	P04819	755 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	ERR1	P0CX10	437 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	ERR2	P0CX11	437 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	YKR018C	P36114	725 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	YKR051W	P36142	418 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	DSS1	P39112	969 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	PIG2	P40187	538 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	SPC98	P53540	846 aa		4.84	□□□□□ -1.63
VMA6	YLR447C	HMO1	Q03973	246 aa	Known RBP	4.84	□□□□□ -1.63
VMA6	YLR447C	TMT1	P32643	299 aa		4.83	□□□□□ -1.64
VMA6	YLR447C	DOT6	P40059	670 aa	Known RBP	4.83	□□□□□ -1.64
VMA6	YLR447C	NOP9	P47077	666 aa	Known RBP	4.83	□□□□□ -1.64
VMA6	YLR447C	MAL11	P53048	616 aa		4.83	□□□□□ -1.64
VMA6	YLR447C	YGR151C	P53287	111 aa		4.83	□□□□□ -1.64
VMA6	YLR447C	SEG1	Q04279	960 aa		4.83	□□□□□ -1.64
VMA6	YLR447C	YOL098C	Q12496	1037 aa		4.83	□□□□□ -1.64
VMA6	YLR447C	PRP28	P23394	588 aa		4.82	□□□□□ -1.64
VMA6	YLR447C	HOG1	P32485	435 aa		4.82	□□□□□ -1.64
VMA6	YLR447C	GID8	P40208	455 aa		4.82	□□□□□ -1.64
VMA6	YLR447C	RSC8	P43609	557 aa	Known RBP	4.82	□□□□□ -1.64
VMA6	YLR447C	RIM13	Q03792	727 aa		4.82	□□□□□ -1.64
VMA6	YLR447C	RGC1	Q06108	1083 aa	Known RBP	4.82	□□□□□ -1.64
VMA6	YLR447C	VBA3	P25594	458 aa		4.81	□□□□□ -1.64
VMA6	YLR447C	SET3	P36124	751 aa		4.81	□□□□□ -1.64
VMA6	YLR447C	BIT2	P38346	545 aa		4.81	□□□□□ -1.64
VMA6	YLR447C	ECM3	Q99252	613 aa		4.81	□□□□□ -1.64
VMA6	YLR447C	BCS1	P32839	456 aa		4.8	□□□□□ -1.64
VMA6	YLR447C	APN2	P38207	520 aa		4.8	□□□□□ -1.64
VMA6	YLR447C	SET2	P46995	733 aa	Known RBP	4.8	□□□□□ -1.64
VMA6	YLR447C	YDL086W	Q07505	273 aa		4.8	□□□□□ -1.64
VMA6	YLR447C	OSW1	Q08692	278 aa		4.8	□□□□□ -1.64
VMA6	YLR447C	SRD1	P09007	221 aa		4.79	□□□□□ -1.64
VMA6	YLR447C	PTP1	P25044	335 aa		4.79	□□□□□ -1.64
VMA6	YLR447C	TIM23	P32897	222 aa		4.79	□□□□□ -1.64
VMA6	YLR447C	YKL091C	P33324	310 aa	Known RBP	4.79	□□□□□ -1.64
VMA6	YLR447C	KSP1	P38691	1029 aa	Known RBP	4.79	□□□□□ -1.64
VMA6	YLR447C	FMP30	Q02883	468 aa		4.79	□□□□□ -1.64
VMA6	YLR447C	THI22	Q06490	572 aa		4.79	□□□□□ -1.64
VMA6	YLR447C	BMS1	Q08965	1183 aa	Known RBP	4.79	□□□□□ -1.64
VMA6	YLR447C	CHS5	Q12114	671 aa	Known RBP	4.79	□□□□□ -1.64
VMA6	YLR447C	ERG11	P10614	530 aa		4.78	□□□□□ -1.64
VMA6	YLR447C	STE12	P13574	688 aa		4.78	□□□□□ -1.64
VMA6	YLR447C	SEC15	P22224	910 aa		4.78	□□□□□ -1.64
VMA6	YLR447C	APL3	P38065	1025 aa		4.78	□□□□□ -1.64
VMA6	YLR447C	GPD1	Q00055	391 aa	Known RBP	4.78	□□□□□ -1.64
VMA6	YLR447C	YLR125W	Q12138	136 aa		4.78	□□□□□ -1.64
VMA6	YLR447C	ADE5,7	P07244	802 aa	Known RBP	4.77	□□□□□ -1.65
VMA6	YLR447C	MIH1	P23748	554 aa		4.77	□□□□□ -1.65
VMA6	YLR447C	SAT4	P25333	603 aa	Known RBP	4.77	□□□□□ -1.65
VMA6	YLR447C	NTH1	P32356	751 aa		4.77	□□□□□ -1.65
VMA6	YLR447C	RPN4	Q03465	531 aa		4.77	□□□□□ -1.65
VMA6	YLR447C	COG8	Q04632	607 aa		4.77	□□□□□ -1.65
VMA6	YLR447C	UGP1	P32861	499 aa	Known RBP	4.76	□□□□□ -1.65
VMA6	YLR447C	YMC2	P38087	329 aa		4.76	□□□□□ -1.65
VMA6	YLR447C	YNL195C	P40168	261 aa		4.76	□□□□□ -1.65
VMA6	YLR447C	NMA2	P53204	395 aa		4.76	□□□□□ -1.65
VMA6	YLR447C	ARP4	P80428	489 aa		4.76	□□□□□ -1.65
VMA6	YLR447C	ERG20	P08524	352 aa	Known RBP	4.75	□□□□□ -1.65
VMA6	YLR447C	RAD18	P10862	487 aa		4.75	□□□□□ -1.65
VMA6	YLR447C	CTP1	P38152	299 aa		4.75	□□□□□ -1.65
VMA6	YLR447C	PMC1	P38929	1173 aa	Predicted RBP	4.75	□□□□□ -1.65
VMA6	YLR447C	LTP1	P40347	161 aa		4.75	□□□□□ -1.65
VMA6	YLR447C	NUP82	P40368	713 aa		4.75	□□□□□ -1.65
VMA6	YLR447C	MPS3	P47069	682 aa		4.75	□□□□□ -1.65
VMA6	YLR447C	UGO1	Q03327	502 aa		4.75	□□□□□ -1.65
VMA6	YLR447C	YSH1	Q06224	779 aa	Predicted RBP	4.75	□□□□□ -1.65
VMA6	YLR447C	ISA1	Q07821	250 aa	Predicted RBP	4.75	□□□□□ -1.65
VMA6	YLR447C	MDM20	Q12387	796 aa	Known RBP	4.75	□□□□□ -1.65
VMA6	YLR447C	PHO8	P11491	566 aa		4.74	□□□□□ -1.65
VMA6	YLR447C	MEF1	P25039	761 aa		4.74	□□□□□ -1.65
VMA6	YLR447C	FEN2	P25621	512 aa	Known RBP	4.74	□□□□□ -1.65
VMA6	YLR447C	PEX6	P33760	1030 aa		4.74	□□□□□ -1.65
VMA6	YLR447C	MNN4	P36044	1178 aa		4.74	□□□□□ -1.65
VMA6	YLR447C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
VMA6	YLR447C	YHR097C	P38809	366 aa	Known RBP	4.74	□□□□□ -1.65
VMA6	YLR447C	POM34	Q12445	299 aa		4.74	□□□□□ -1.65
VMA6	YLR447C	LAM4	P38800	1345 aa		4.73	□□□□□ -1.65
VMA6	YLR447C	PGK1	P00560	416 aa	Known RBP	4.73	□□□□□ -1.65
VMA6	YLR447C	NUP1	P20676	1076 aa		4.73	□□□□□ -1.65
VMA6	YLR447C	MSH2	P25847	964 aa		4.73	□□□□□ -1.65
VMA6	YLR447C	YEL1	P34225	687 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms