RNA–Protein interactions for RNA: YLR048W

RPS0B, Transcript of Protein component of the small (40S) ribosomal subunit, yeast

Gene RPS0B, Length 759 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS0B	YLR048W	TAF5	P38129	798 aa		5.4	□□□□□ -1.54
RPS0B	YLR048W	RFC5	P38251	354 aa		5.4	□□□□□ -1.54
RPS0B	YLR048W	SWD1	P39706	426 aa		5.4	□□□□□ -1.54
RPS0B	YLR048W	SSP120	P39931	234 aa	Known RBP	5.4	□□□□□ -1.54
RPS0B	YLR048W	YEL076C	P39971	216 aa		5.4	□□□□□ -1.54
RPS0B	YLR048W	CPR6	P53691	371 aa	Known RBP	5.4	□□□□□ -1.54
RPS0B	YLR048W	LEE1	Q02799	301 aa	Known RBP	5.4	□□□□□ -1.54
RPS0B	YLR048W	SSL1	Q04673	461 aa	Predicted RBP	5.4	□□□□□ -1.54
RPS0B	YLR048W	IMH1	Q06704	911 aa	Known RBP	5.4	□□□□□ -1.54
RPS0B	YLR048W	MRP7	P12687	371 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
RPS0B	YLR048W	MCM3	P24279	971 aa	Known RBP	5.39	□□□□□ -1.55
RPS0B	YLR048W	APL1	P27351	700 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	MF(ALPHA)2	P32435	120 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	SFA1	P32771	386 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	DUN1	P39009	513 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	NOP16	P40007	231 aa	Known RBP	5.39	□□□□□ -1.55
RPS0B	YLR048W	PUG1	P40100	303 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	SSY5	P47002	699 aa		5.39	□□□□□ -1.55
RPS0B	YLR048W	SNF1	P06782	633 aa	Known RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	FBP1	P09201	348 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	KIN2	P13186	1147 aa	Known RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	NCP1	P16603	691 aa	Known RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	CBP3	P21560	335 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	UBC1	P21734	215 aa	Known RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	RSC6	P25632	483 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	IMG2	P25642	146 aa	Predicted RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	PAH1	P32567	862 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	TOA1	P32773	286 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	APN2	P38207	520 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	IMA5	P40884	581 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	SET2	P46995	733 aa	Known RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	SGM1	P47166	707 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	UPF3	P48412	387 aa	Known RBP	5.38	□□□□□ -1.55
RPS0B	YLR048W	ORC4	P54791	529 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	CDA1	Q06702	301 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	BRE4	Q07660	1125 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	GAS5	Q08193	484 aa		5.38	□□□□□ -1.55
RPS0B	YLR048W	PHO5	P00635	467 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	LEU2	P04173	364 aa	Predicted RBP	5.37	□□□□□ -1.55
RPS0B	YLR048W	CMP2	P14747	604 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	AAC3	P18238	307 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	OPI1	P21957	404 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	NUP120	P35729	1037 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	BCD1	P38772	366 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	AXL2	P38928	823 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	PSF2	P40359	213 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	FAF1	P40546	346 aa	Predicted RBP	5.37	□□□□□ -1.55
RPS0B	YLR048W	MMM1	P41800	426 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	JJJ3	P47138	172 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	MTR3	P48240	250 aa	Predicted RBP	5.37	□□□□□ -1.55
RPS0B	YLR048W	EXG2	P52911	562 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	YGR012W	P53206	393 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	MSC2	Q03455	724 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	GSF2	Q04697	403 aa	Known RBP	5.37	□□□□□ -1.55
RPS0B	YLR048W	VID22	Q05934	901 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	YPS7	Q06325	596 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	GRC3	Q07845	632 aa		5.37	□□□□□ -1.55
RPS0B	YLR048W	RTK1	Q12100	620 aa	Predicted RBP	5.37	□□□□□ -1.55
RPS0B	YLR048W	MIS1	P09440	975 aa	Known RBP	5.36	□□□□□ -1.55
RPS0B	YLR048W	CLB4	P24871	460 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	ADP1	P25371	1049 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	SWI3	P32591	825 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	AIM26	P32858	118 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	WHI3	P34761	661 aa	Known RBP	5.36	□□□□□ -1.55
RPS0B	YLR048W	STT3	P39007	718 aa	Known RBP	5.36	□□□□□ -1.55
RPS0B	YLR048W	YEL068C	P39977	110 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	DPH1	P40487	425 aa	Known RBP	5.36	□□□□□ -1.55
RPS0B	YLR048W	VHR1	P40522	640 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	MAD2	P40958	196 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	CCT8	P47079	568 aa	Known RBP	5.36	□□□□□ -1.55
RPS0B	YLR048W	SAP4	P53036	818 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	RBG2	P53295	368 aa	Known RBP	5.36	□□□□□ -1.55
RPS0B	YLR048W	SRC1	Q03707	834 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	SIZ1	Q04195	904 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	STP4	Q07351	490 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	VHS3	Q08438	674 aa		5.36	□□□□□ -1.55
RPS0B	YLR048W	SPS1	P08458	490 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	GUK1	P15454	187 aa	Known RBP	5.35	□□□□□ -1.55
RPS0B	YLR048W	SIR1	P21691	654 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	CMK1	P27466	446 aa	Known RBP	5.35	□□□□□ -1.55
RPS0B	YLR048W	LRG1	P35688	1017 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	ABZ1	P37254	787 aa	Predicted RBP	5.35	□□□□□ -1.55
RPS0B	YLR048W	RKM3	P38222	552 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	UBS1	P38290	277 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	YLF2	P38746	405 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	YHR078W	P38799	552 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	CTF8	P38877	133 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	UME6	P39001	836 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	CIT3	P43635	486 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	BUD9	P53226	547 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	CBK1	P53894	756 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	RSM24	Q03976	319 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	SXM1	Q04175	944 aa	Known RBP	5.35	□□□□□ -1.55
RPS0B	YLR048W	TRI1	Q05024	226 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	TFC6	Q06339	672 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	IWR1	Q07532	353 aa	Predicted RBP	5.35	□□□□□ -1.55
RPS0B	YLR048W	DIN7	Q12086	430 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	PHM7	Q12252	991 aa		5.35	□□□□□ -1.55
RPS0B	YLR048W	DBP10	Q12389	995 aa	Known RBP	5.35	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 43.8 ms