RNA–Protein interactions for RNA: YHR041C

SRB2, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB2, Length 633 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB2	YHR041C	PET123	P17558	318 aa		14	□□□□□ -0.17
SRB2	YHR041C	URK1	P27515	501 aa		14	□□□□□ -0.17
SRB2	YHR041C	SPC110	P32380	944 aa		14	□□□□□ -0.17
SRB2	YHR041C	PEP7	P32609	515 aa		14	□□□□□ -0.17
SRB2	YHR041C	YBR056W	P38081	501 aa		14	□□□□□ -0.17
SRB2	YHR041C	TCD1	P38756	429 aa		14	□□□□□ -0.17
SRB2	YHR041C	GEM1	P39722	662 aa		14	□□□□□ -0.17
SRB2	YHR041C	YEL023C	P39992	682 aa		14	□□□□□ -0.17
SRB2	YHR041C	DSE1	P40077	573 aa		14	□□□□□ -0.17
SRB2	YHR041C	YTA12	P40341	825 aa		14	□□□□□ -0.17
SRB2	YHR041C	YIR016W	P40572	265 aa		14	□□□□□ -0.17
SRB2	YHR041C	VPS54	Q12071	889 aa		14	□□□□□ -0.17
SRB2	YHR041C	RPS3	P05750	240 aa	Known RBP	13.99	□□□□□ -0.17
SRB2	YHR041C	EST1	P17214	699 aa	Predicted RBP	13.99	□□□□□ -0.17
SRB2	YHR041C	SEC21	P32074	935 aa	Known RBP	13.99	□□□□□ -0.17
SRB2	YHR041C	MRP4	P32902	394 aa		13.99	□□□□□ -0.17
SRB2	YHR041C	RPT2	P40327	437 aa	Known RBP	13.99	□□□□□ -0.17
SRB2	YHR041C	MET13	P53128	600 aa		13.99	□□□□□ -0.17
SRB2	YHR041C	TRE1	Q08919	783 aa		13.99	□□□□□ -0.17
SRB2	YHR041C	SNF1	P06782	633 aa	Known RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	KAR3	P17119	729 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	ABZ1	P37254	787 aa	Predicted RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	YBL036C	P38197	257 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	MCX1	P38323	520 aa	Predicted RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	PCM1	P38628	557 aa	Known RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	QNS1	P38795	714 aa	Known RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	YJR054W	P47114	497 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	YGR021W	P53212	290 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	13.98	□□□□□ -0.17	not detected
SRB2	YHR041C	NGL3	Q03210	505 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	TIF35	Q04067	274 aa	Known RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	OPY2	Q06810	360 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	TSR1	Q07381	788 aa	Known RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	YOR059C	Q08448	450 aa	Known RBP	13.98	□□□□□ -0.17
SRB2	YHR041C	DAS2	Q12084	232 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	MCM16	Q12262	181 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	APM4	Q99186	491 aa		13.98	□□□□□ -0.17
SRB2	YHR041C	YER152C	P10356	443 aa		13.97	□□□□□ -0.17
SRB2	YHR041C	VPS3	P23643	1011 aa		13.97	□□□□□ -0.17
SRB2	YHR041C	HMT1	P38074	348 aa		13.97	□□□□□ -0.17
SRB2	YHR041C	APT1	P49435	187 aa	Known RBP	13.97	□□□□□ -0.17
SRB2	YHR041C	MND1	P53102	219 aa		13.97	□□□□□ -0.17
SRB2	YHR041C	NUT1	P53114	1132 aa		13.97	□□□□□ -0.17
SRB2	YHR041C	DIS3	Q08162	1001 aa	Known RBP	13.97	□□□□□ -0.17
SRB2	YHR041C	GAC1	P28006	793 aa		13.96	□□□□□ -0.17
SRB2	YHR041C	PAP1	P29468	568 aa	Known RBP	13.96	□□□□□ -0.17
SRB2	YHR041C	MSC7	P38694	644 aa		13.96	□□□□□ -0.17
SRB2	YHR041C	ASG1	P40467	964 aa		13.96	□□□□□ -0.17
SRB2	YHR041C	BRO1	P48582	844 aa		13.96	□□□□□ -0.17
SRB2	YHR041C	EMP46	Q12396	444 aa		13.96	□□□□□ -0.17
SRB2	YHR041C	YPR117W	Q06116	2489 aa		13.95	□□□□□ -0.18
SRB2	YHR041C	STB5	P38699	743 aa		13.95	□□□□□ -0.18
SRB2	YHR041C	MAF1	P41910	395 aa		13.95	□□□□□ -0.18
SRB2	YHR041C	STU2	P46675	888 aa		13.95	□□□□□ -0.18
SRB2	YHR041C	YGR111W	P53265	400 aa		13.95	□□□□□ -0.18
SRB2	YHR041C	SYH1	Q02875	849 aa	Known RBP	13.95	□□□□□ -0.18
SRB2	YHR041C	SAM3	Q08986	587 aa		13.95	□□□□□ -0.18
SRB2	YHR041C	BTN2	P53286	410 aa		13.94	□□□□□ -0.18
SRB2	YHR041C	ARO80	Q04052	950 aa		13.94	□□□□□ -0.18
SRB2	YHR041C	MRI1	Q06489	411 aa	Known RBP	13.94	□□□□□ -0.18
SRB2	YHR041C	VAC14	Q06708	880 aa		13.94	□□□□□ -0.18
SRB2	YHR041C	VMA4	P22203	233 aa	Known RBP	13.93	□□□□□ -0.18
SRB2	YHR041C	PEX1	P24004	1043 aa		13.93	□□□□□ -0.18
SRB2	YHR041C	YMR018W	Q04364	514 aa		13.93	□□□□□ -0.18
SRB2	YHR041C	PRM6	Q04705	352 aa		13.93	□□□□□ -0.18
SRB2	YHR041C	HRT3	Q12347	344 aa		13.93	□□□□□ -0.18
SRB2	YHR041C	GFA1	P14742	717 aa	Known RBP	13.92	□□□□□ -0.18
SRB2	YHR041C	NOP4	P37838	685 aa	Known RBP	13.92	□□□□□ -0.18
SRB2	YHR041C	YMC2	P38087	329 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	APM2	P38700	605 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	RIM4	P38741	713 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	TDA3	P38758	523 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	YER189W	P40104	122 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	MCM6	P53091	1017 aa	Known RBP	13.92	□□□□□ -0.18
SRB2	YHR041C	YNL034W	P53963	612 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	YNL018C	P53976	612 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	SML1	Q04964	104 aa		13.92	□□□□□ -0.18
SRB2	YHR041C	RCL1	Q08096	367 aa	Predicted RBP	13.92	□□□□□ -0.18
SRB2	YHR041C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	13.92	□□□□□ -0.18	not detected
SRB2	YHR041C	LRE1	P25579	583 aa	Known RBP	13.91	□□□□□ -0.18
SRB2	YHR041C	CAP1	P28495	268 aa	Known RBP	13.91	□□□□□ -0.18
SRB2	YHR041C	TKL2	P33315	681 aa		13.91	□□□□□ -0.18
SRB2	YHR041C	KAP114	P53067	1004 aa		13.91	□□□□□ -0.18
SRB2	YHR041C	YVH1	Q02256	364 aa	Known RBP	13.91	□□□□□ -0.18
SRB2	YHR041C	ELP3	Q02908	557 aa	Known RBP	13.91	□□□□□ -0.18
SRB2	YHR041C	GPM2	Q12008	311 aa		13.91	□□□□□ -0.18
SRB2	YHR041C	RRT2	P38332	387 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	HIS2	P38635	335 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	SMF1	P38925	575 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	CAJ1	P39101	391 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	TMN3	P40071	706 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	PFD1	P46988	109 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	ADA2	Q02336	434 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	YPL062W	Q02781	134 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	MDM38	Q08179	573 aa		13.9	□□□□□ -0.18
SRB2	YHR041C	LEA1	Q08963	238 aa	Predicted RBP	13.9	□□□□□ -0.18
SRB2	YHR041C	BLI1	P35727	113 aa		13.89	□□□□□ -0.19
SRB2	YHR041C	NMD3	P38861	518 aa	Known RBP	13.89	□□□□□ -0.19
SRB2	YHR041C	HEH2	Q03281	663 aa		13.89	□□□□□ -0.19
SRB2	YHR041C	YML083C	Q04526	418 aa		13.89	□□□□□ -0.19

Retrieved 100 of 5,963 RNA–protein pairs in 31.2 ms