RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRM3	YHR031C	RNR4	P49723	345 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	FMS1	P50264	508 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	COG6	P53959	839 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	TGL2	P54857	326 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	SWP1	Q02795	286 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	INA17	Q02888	182 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	ISU1	Q03020	165 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	FIN1	Q03898	291 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	UTP14	Q04500	899 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	SYT1	Q06836	1226 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	MLH2	Q07980	695 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	SOG2	Q08817	791 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	RSA1	Q08932	381 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	MSH5	Q12175	901 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	CAT8	P39113	1433 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	PDR5	P33302	1511 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	SPS1	P08458	490 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	ADE2	P21264	571 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	ISY1	P21374	235 aa	Predicted RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	PGS1	P25578	521 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	DAL80	P26343	269 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	FBP26	P32604	452 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	GDA1	P32621	518 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	MKS1	P34072	584 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	BAP2	P38084	609 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	MCX1	P38323	520 aa	Predicted RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	STP2	P38704	541 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	RPN10	P38886	268 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	DOT6	P40059	670 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	KAP123	P40069	1113 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	ULP2	P40537	1034 aa	Predicted RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	STB2	P46679	850 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	YGL176C	P46945	554 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	LYS4	P49367	693 aa	Predicted RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	ARI1	P53111	347 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	YGR067C	P53243	804 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	SPO1	P53541	631 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	SQS1	P53866	767 aa	Known RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	PTA1	Q01329	785 aa	Predicted RBP	3.19	□□□□□ -1.9
RRM3	YHR031C	DFG5	Q05031	458 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	MCM21	Q06675	368 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	VPS36	Q06696	566 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	SDH5	Q08230	162 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	APC11	Q12157	165 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	BBP1	Q12365	385 aa		3.19	□□□□□ -1.9
RRM3	YHR031C	PHO8	P11491	566 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	THR1	P17423	357 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	GLK1	P17709	500 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	CLN2	P20438	545 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	IME1	P21190	360 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
RRM3	YHR031C	SRM1	P21827	482 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RSC6	P25632	483 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	KRE6	P32486	720 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	VMA8	P32610	256 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	UTR2	P32623	467 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YME1	P32795	747 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	KES1	P35844	434 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	MRX3	P38172	270 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	FES1	P38260	290 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YBR197C	P38306	217 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RRF1	P38771	230 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	APE4	P38821	490 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	TDA11	P38854	504 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YJR120W	P47157	116 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	STB4	P50104	949 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	TAF12	Q03761	539 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RSM24	Q03976	319 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	TRS120	Q04183	1289 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	TAF11	Q04226	346 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	CAB1	Q04430	367 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YDL124W	Q07551	312 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	LOT6	Q07923	191 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	BDS1	Q08347	646 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YOR131C	Q12486	218 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	ADE6	P38972	1358 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	FOB1	O13329	566 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	ADE8	P04161	214 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	SES1	P07284	462 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	MPH2	P0CD99	609 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	DSF1	P0CX08	502 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YNR073C	P0CX09	502 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	ERR1	P0CX10	437 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	ERR2	P0CX11	437 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RAD4	P14736	754 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RPL8A	P17076	256 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	DAL7	P21826	554 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	MRPL8	P22353	238 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	PEX1	P24004	1043 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	PHO3	P24031	467 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	BUD23	P25627	275 aa	Predicted RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	KTR2	P33550	425 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RRM3	P38766	723 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	RTC3	P38804	111 aa	Predicted RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	PIK1	P39104	1066 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	YER156C	P40093	338 aa	Known RBP	3.18	□□□□□ -1.9
RRM3	YHR031C	YER186C	P40101	306 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	QDR2	P40474	542 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	PCI8	P40512	444 aa		3.18	□□□□□ -1.9
RRM3	YHR031C	INA22	P40576	216 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms