RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	DBP3	P20447	523 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	APN1	P22936	367 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	ILV6	P25605	309 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	KIP2	P28743	706 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	KTR2	P33550	425 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	TPO5	P36029	618 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	AKL1	P38080	1108 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	CTM1	P38818	585 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	PMC1	P38929	1173 aa	Predicted RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	DLD3	P39976	496 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	SMX2	P40204	77 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	ALG5	P40350	334 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	DAN4	P47179	1161 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	SPC105	P53148	917 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	LSC2	P53312	427 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	NOG1	Q02892	647 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	CAB1	Q04430	367 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	BRX1	Q08235	291 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	ATP16	Q12165	160 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	TRM11	Q12463	433 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	SUP45	P12385	437 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	NCP1	P16603	691 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	DAP2	P18962	818 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	MCD4	P36051	919 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	RPH1	P39956	796 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	YER186C	P40101	306 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	YIL077C	P40508	320 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	COG2	P53271	262 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	RPT6	Q01939	405 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	DBP9	Q06218	594 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	YEH2	Q07950	538 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	GAS4	Q08271	471 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	SGO1	Q08490	590 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	YDL109C	Q12103	647 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	MNL2	Q12205	849 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	NMT1	P14743	455 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	ISY1	P21374	235 aa	Predicted RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	VMA4	P22203	233 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	PEX1	P24004	1043 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	RAM2	P29703	316 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	FBP26	P32604	452 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	MRPL17	P36528	281 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	APE4	P38821	490 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	YGR237C	P50089	785 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	MAL11	P53048	616 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	UTP8	P53276	713 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	FYV6	P53913	173 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	UBX4	P54730	416 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	ELP3	Q02908	557 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	YMR010W	Q03687	405 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	ACL4	Q03771	387 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	ARX1	Q03862	593 aa	Known RBP	4.77	□□□□□ -1.65
MDR1	YGR100W	RNH1	Q04740	348 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	SPO21	Q12411	609 aa		4.77	□□□□□ -1.65
MDR1	YGR100W	MATALPHA2	P0CY08	210 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	HMLALPHA2	P0CY09	210 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	CLN3	P13365	580 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	KRE2	P27809	442 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	SBA1	P28707	216 aa	Known RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	EUG1	P32474	517 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	GCG1	P32656	232 aa	Known RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	MDJ1	P35191	511 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	RSM22	P36056	628 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	MAL31	P38156	614 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	KIC1	P38692	1080 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	QDR2	P40474	542 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	CAB2	P40506	365 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	MNT3	P40549	630 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	FMP33	P46998	180 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	VTC4	P47075	721 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	YJR039W	P47107	1121 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	DRN1	P53255	507 aa	Known RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	SLT2	Q00772	484 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	SHE9	Q04172	456 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	BUD22	Q04347	519 aa	Known RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	GTB1	Q04924	702 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	YLR407W	Q06070	228 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	GIC2	Q06648	383 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	YLL007C	Q07799	665 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	SAM3	Q08986	587 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	CWC2	Q12046	339 aa	Predicted RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	GET4	Q12125	312 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	DPH6	Q12429	685 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	RAD61	Q99359	647 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	POL3	P15436	1097 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
MDR1	YGR100W	CLN2	P20438	545 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	HSP30	P25619	332 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	NAM7	P30771	971 aa	Known RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	YME1	P32795	747 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	YBL055C	P34220	418 aa	Predicted RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	RPC25	P35718	212 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	SLM4	P38247	162 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	STM1	P39015	273 aa	Known RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	BOI2	P39969	1040 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	DSE1	P40077	573 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	FMP10	P40098	244 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	JEM1	P40358	645 aa		4.76	□□□□□ -1.65
MDR1	YGR100W	ULP2	P40537	1034 aa	Predicted RBP	4.76	□□□□□ -1.65
MDR1	YGR100W	EMW1	P42842	904 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms