RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W YKL050CP35736 922 aa7.34□□□□□ -1.23
SNU71YGR013W DHR2P36009 735 aaPredicted RBP7.34□□□□□ -1.23
SNU71YGR013W YKR018CP36114 725 aa7.34□□□□□ -1.23
SNU71YGR013W AXL2P38928 823 aa7.34□□□□□ -1.23
SNU71YGR013W SHR5P41912 237 aa7.34□□□□□ -1.23
SNU71YGR013W CCT8P47079 568 aaKnown RBP7.34□□□□□ -1.23
SNU71YGR013W TDA9Q04545 1251 aa7.34□□□□□ -1.23
SNU71YGR013W YOR059CQ08448 450 aaKnown RBP7.34□□□□□ -1.23
SNU71YGR013W YLR149CQ99296 730 aa7.34□□□□□ -1.23
SNU71YGR013W GLN4P13188 809 aaKnown RBP7.33□□□□□ -1.24
SNU71YGR013W CDC26P14724 124 aa7.33□□□□□ -1.24
SNU71YGR013W MET8P15807 274 aa7.33□□□□□ -1.24
SNU71YGR013W NCP1P16603 691 aaKnown RBP7.33□□□□□ -1.24
SNU71YGR013W ECM32P32644 1121 aaKnown RBP7.33□□□□□ -1.24
SNU71YGR013W APE4P38821 490 aa7.33□□□□□ -1.24
SNU71YGR013W YEL068CP39977 110 aa7.33□□□□□ -1.24
SNU71YGR013W VHR1P40522 640 aa7.33□□□□□ -1.24
SNU71YGR013W RBG2P53295 368 aaKnown RBP7.33□□□□□ -1.24
SNU71YGR013W YPR196WQ06595 470 aa7.33□□□□□ -1.24
SNU71YGR013W RAS1P01119 309 aa7.32□□□□□ -1.24
SNU71YGR013W ADH4P10127 382 aa7.32□□□□□ -1.24
SNU71YGR013W MTF2P10849 440 aa7.32□□□□□ -1.24
SNU71YGR013W RFA1P22336 621 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W VID28P40547 921 aa7.32□□□□□ -1.24
SNU71YGR013W SBE2P42223 864 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W YFL052WP43551 465 aa7.32□□□□□ -1.24
SNU71YGR013W MRPL13Q02204 264 aa7.32□□□□□ -1.24
SNU71YGR013W YMR265CQ03508 461 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W NGL1Q08213 363 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W SCM3Q12334 223 aa7.32□□□□□ -1.24
SNU71YGR013W STH1P32597 1359 aa7.32□□□□□ -1.24
SNU71YGR013W YCL049CP25577 312 aa7.32□□□□□ -1.24
SNU71YGR013W HXT4P32467 576 aa7.32□□□□□ -1.24
SNU71YGR013W PPE1P38796 400 aa7.32□□□□□ -1.24
SNU71YGR013W SET5P38890 526 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W DUN1P39009 513 aa7.32□□□□□ -1.24
SNU71YGR013W STL1P39932 569 aa7.32□□□□□ -1.24
SNU71YGR013W SCS2P40075 244 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W IRC5P43610 853 aa7.32□□□□□ -1.24
SNU71YGR013W YJL171CP46992 396 aa7.32□□□□□ -1.24
SNU71YGR013W ZIP2P53061 704 aa7.32□□□□□ -1.24
SNU71YGR013W CPR6P53691 371 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W HDA1P53973 706 aa7.32□□□□□ -1.24
SNU71YGR013W ARP4P80428 489 aa7.32□□□□□ -1.24
SNU71YGR013W YKU80Q04437 629 aa7.32□□□□□ -1.24
SNU71YGR013W GSF2Q04697 403 aaKnown RBP7.32□□□□□ -1.24
SNU71YGR013W RGA2Q06407 1009 aa7.32□□□□□ -1.24
SNU71YGR013W MCH5Q08777 521 aa7.32□□□□□ -1.24
SNU71YGR013W GUK1P15454 187 aaKnown RBP7.31□□□□□ -1.24
SNU71YGR013W SPO16P17122 198 aa7.31□□□□□ -1.24
SNU71YGR013W PEX5P35056 612 aa7.31□□□□□ -1.24
SNU71YGR013W NNK1P36003 928 aa7.31□□□□□ -1.24
SNU71YGR013W SDS22P36047 338 aa7.31□□□□□ -1.24
SNU71YGR013W SAP190P36123 1033 aa7.31□□□□□ -1.24
SNU71YGR013W NOP4P37838 685 aaKnown RBP7.31□□□□□ -1.24
SNU71YGR013W PUG1P40100 303 aa7.31□□□□□ -1.24
SNU71YGR013W DOT1Q04089 582 aaKnown RBP7.31□□□□□ -1.24
SNU71YGR013W TAF11Q04226 346 aa7.31□□□□□ -1.24
SNU71YGR013W VID22Q05934 901 aa7.31□□□□□ -1.24
SNU71YGR013W HRK1Q08732 759 aaKnown RBP7.31□□□□□ -1.24
SNU71YGR013W NSI1Q12457 570 aa7.31□□□□□ -1.24
SNU71YGR013W HSH49Q99181 213 aaPredicted RBP7.31□□□□□ -1.24
SNU71YGR013W ADP1P25371 1049 aa7.3□□□□□ -1.24
SNU71YGR013W CMK1P27466 446 aaKnown RBP7.3□□□□□ -1.24
SNU71YGR013W KNS1P32350 737 aaPredicted RBP7.3□□□□□ -1.24
SNU71YGR013W YSC84P32793 468 aa7.3□□□□□ -1.24
SNU71YGR013W TGL1P34163 548 aa7.3□□□□□ -1.24
SNU71YGR013W RIC1P40395 1056 aa7.3□□□□□ -1.24
SNU71YGR013W GPD2P41911 440 aaKnown RBP7.3□□□□□ -1.24
SNU71YGR013W YJR039WP47107 1121 aa7.3□□□□□ -1.24
SNU71YGR013W TNA1P53322 534 aa7.3□□□□□ -1.24
SNU71YGR013W TIM10P87108 93 aa7.3□□□□□ -1.24
SNU71YGR013W MTD1Q02046 320 aaKnown RBP7.3□□□□□ -1.24
SNU71YGR013W YLR287CQ05881 355 aa7.3□□□□□ -1.24
SNU71YGR013W TFC6Q06339 672 aa7.3□□□□□ -1.24
SNU71YGR013W PSF3Q12146 194 aa7.3□□□□□ -1.24
SNU71YGR013W NUC1P08466 329 aa7.3□□□□□ -1.24
SNU71YGR013W SAC7P17121 654 aa7.3□□□□□ -1.24
SNU71YGR013W STE13P33894 931 aa7.3□□□□□ -1.24
SNU71YGR013W SRP68P38687 599 aaKnown RBP7.3□□□□□ -1.24
SNU71YGR013W SSZ1P38788 538 aaKnown RBP7.3□□□□□ -1.24
SNU71YGR013W SWD1P39706 426 aa7.3□□□□□ -1.24
SNU71YGR013W CEP3P40969 608 aa7.3□□□□□ -1.24
SNU71YGR013W BRE2P43132 505 aa7.3□□□□□ -1.24
SNU71YGR013W RRT6P53117 311 aaPredicted RBP7.3□□□□□ -1.24
SNU71YGR013W MRPL19P53875 158 aa7.3□□□□□ -1.24
SNU71YGR013W CUZ1P53899 274 aa7.3□□□□□ -1.24
SNU71YGR013W IRC3Q06683 689 aa7.3□□□□□ -1.24
SNU71YGR013W RCL1Q08096 367 aaPredicted RBP7.3□□□□□ -1.24
SNU71YGR013W TRM8Q12009 286 aa7.3□□□□□ -1.24
SNU71YGR013W PDR12Q02785 1511 aa7.29□□□□□ -1.24
SNU71YGR013W HSP82P02829 709 aaKnown RBP7.29□□□□□ -1.24
SNU71YGR013W SMY2P32909 740 aaKnown RBP7.29□□□□□ -1.24
SNU71YGR013W IMA5P40884 581 aa7.29□□□□□ -1.24
SNU71YGR013W IRC6P43615 237 aa7.29□□□□□ -1.24
SNU71YGR013W MPP10P47083 593 aaKnown RBP7.29□□□□□ -1.24
SNU71YGR013W BFA1P47113 574 aa7.29□□□□□ -1.24
SNU71YGR013W NOP15P53927 220 aaPredicted RBP7.29□□□□□ -1.24
SNU71YGR013W ERO1Q03103 563 aa7.29□□□□□ -1.24
SNU71YGR013W YOR223WQ12015 292 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 42.1 ms