RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C DAL1P32375 460 aa7.12□□□□□ -1.27
SHO1YER118C MDL2P33311 773 aa7.12□□□□□ -1.27
SHO1YER118C YKR078WP36158 585 aaKnown RBP7.12□□□□□ -1.27
SHO1YER118C IFA38P38286 347 aa7.12□□□□□ -1.27
SHO1YER118C SWD1P39706 426 aa7.12□□□□□ -1.27
SHO1YER118C PSF2P40359 213 aa7.12□□□□□ -1.27
SHO1YER118C YJL068CP40363 299 aa7.12□□□□□ -1.27
SHO1YER118C LYS14P40971 790 aa7.12□□□□□ -1.27
SHO1YER118C ARF3P40994 183 aaRIP-Chip data7.12□□□□□ -1.27not detected
SHO1YER118C TIM11P81449 96 aaPredicted RBP7.12□□□□□ -1.27
SHO1YER118C PHO5P00635 467 aa7.11□□□□□ -1.27
SHO1YER118C TRX1P22217 103 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C MCM3P24279 971 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C YLF2P38746 405 aa7.11□□□□□ -1.27
SHO1YER118C UME6P39001 836 aa7.11□□□□□ -1.27
SHO1YER118C KHA1P40309 873 aa7.11□□□□□ -1.27
SHO1YER118C RLP7P40693 322 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C GYP7P48365 746 aa7.11□□□□□ -1.27
SHO1YER118C NCS2P53923 493 aaPredicted RBP7.11□□□□□ -1.27
SHO1YER118C ZDS2P54786 942 aa7.11□□□□□ -1.27
SHO1YER118C MTD1Q02046 320 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C PRP42Q03776 544 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C HEL2Q05580 639 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C CSR1Q06705 408 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C CDC45Q08032 650 aa7.11□□□□□ -1.27
SHO1YER118C ISA2Q12425 185 aa7.11□□□□□ -1.27
SHO1YER118C NOP58Q12499 511 aaKnown RBP7.11□□□□□ -1.27
SHO1YER118C ARG3P05150 338 aa7.1□□□□□ -1.27
SHO1YER118C MET17P06106 444 aa7.1□□□□□ -1.27
SHO1YER118C NFS1P25374 497 aa7.1□□□□□ -1.27
SHO1YER118C SLA2P33338 968 aa7.1□□□□□ -1.27
SHO1YER118C STE13P33894 931 aa7.1□□□□□ -1.27
SHO1YER118C YKR051WP36142 418 aa7.1□□□□□ -1.27
SHO1YER118C UTP9P38882 575 aaKnown RBP7.1□□□□□ -1.27
SHO1YER118C YAR028WP39548 234 aa7.1□□□□□ -1.27
SHO1YER118C UBP7P40453 1071 aa7.1□□□□□ -1.27
SHO1YER118C IRC5P43610 853 aa7.1□□□□□ -1.27
SHO1YER118C HAS1Q03532 505 aaKnown RBP7.1□□□□□ -1.27
SHO1YER118C SNO4Q04902 237 aa7.1□□□□□ -1.27
SHO1YER118C NGL1Q08213 363 aaKnown RBP7.1□□□□□ -1.27
SHO1YER118C CUE5Q08412 411 aaKnown RBP7.1□□□□□ -1.27
SHO1YER118C HSP33Q08914 237 aaKnown RBP7.1□□□□□ -1.27
SHO1YER118C ACM1Q08981 209 aa7.1□□□□□ -1.27
SHO1YER118C HSP32Q08992 237 aa7.1□□□□□ -1.27
SHO1YER118C HAL9Q12180 1030 aa7.1□□□□□ -1.27
SHO1YER118C SWI6P09959 803 aa7.09□□□□□ -1.27
SHO1YER118C CLB4P24871 460 aa7.09□□□□□ -1.27
SHO1YER118C MDL1P33310 695 aa7.09□□□□□ -1.27
SHO1YER118C SRP68P38687 599 aaKnown RBP7.09□□□□□ -1.27
SHO1YER118C LTP1P40347 161 aa7.09□□□□□ -1.27
SHO1YER118C VID28P40547 921 aa7.09□□□□□ -1.27
SHO1YER118C CIK1Q01649 594 aa7.09□□□□□ -1.27
SHO1YER118C MEC3Q02574 474 aa7.09□□□□□ -1.27
SHO1YER118C RMT2Q03305 412 aa7.09□□□□□ -1.27
SHO1YER118C RPN7Q06103 429 aaKnown RBP7.09□□□□□ -1.27
SHO1YER118C YLR345WQ06137 509 aa7.09□□□□□ -1.27
SHO1YER118C YBR182C-AQ8TGU6 64 aa7.09□□□□□ -1.27
SHO1YER118C DIF1O13577 133 aa7.08□□□□□ -1.28
SHO1YER118C GCN4P03069 281 aa7.08□□□□□ -1.28
SHO1YER118C MNE1P24720 663 aa7.08□□□□□ -1.28
SHO1YER118C ROX1P25042 368 aa7.08□□□□□ -1.28
SHO1YER118C HXT4P32467 576 aa7.08□□□□□ -1.28
SHO1YER118C RPN2P32565 945 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C SAC6P32599 642 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C CNS1P33313 385 aa7.08□□□□□ -1.28
SHO1YER118C ESL2P36168 1195 aa7.08□□□□□ -1.28
SHO1YER118C STT3P39007 718 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C YER158CP40095 573 aa7.08□□□□□ -1.28
SHO1YER118C SEC28P40509 296 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C NEO1P40527 1151 aa7.08□□□□□ -1.28
SHO1YER118C AAD14P42884 376 aa7.08□□□□□ -1.28
SHO1YER118C POL31P46957 487 aa7.08□□□□□ -1.28
SHO1YER118C YKE2P52553 114 aa7.08□□□□□ -1.28
SHO1YER118C NNF2P53253 936 aa7.08□□□□□ -1.28
SHO1YER118C NOG2P53742 486 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C HOT1Q03213 719 aa7.08□□□□□ -1.28
SHO1YER118C LRS4Q04087 347 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C REX3Q12090 404 aa7.08□□□□□ -1.28
SHO1YER118C SGT2Q12118 346 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C RTN2Q12443 393 aa7.08□□□□□ -1.28
SHO1YER118C PAR32Q12515 295 aaKnown RBP7.08□□□□□ -1.28
SHO1YER118C VAS1P07806 1104 aaKnown RBP7.07□□□□□ -1.28
SHO1YER118C CDC4P07834 779 aa7.07□□□□□ -1.28
SHO1YER118C CDC26P14724 124 aa7.07□□□□□ -1.28
SHO1YER118C SUI2P20459 304 aaKnown RBP7.07□□□□□ -1.28
SHO1YER118C CBP3P21560 335 aa7.07□□□□□ -1.28
SHO1YER118C REC107P21651 314 aa7.07□□□□□ -1.28
SHO1YER118C YCL002CP25565 263 aa7.07□□□□□ -1.28
SHO1YER118C SEC21P32074 935 aaKnown RBP7.07□□□□□ -1.28
SHO1YER118C YBR138CP38277 524 aa7.07□□□□□ -1.28
SHO1YER118C VTC4P47075 721 aa7.07□□□□□ -1.28
SHO1YER118C SEC5P89102 971 aa7.07□□□□□ -1.28
SHO1YER118C PEX25Q02969 394 aa7.07□□□□□ -1.28
SHO1YER118C SRC1Q03707 834 aa7.07□□□□□ -1.28
SHO1YER118C YLL058WQ12198 575 aa7.07□□□□□ -1.28
SHO1YER118C ARG82P07250 355 aa7.06□□□□□ -1.28
SHO1YER118C MIS1P09440 975 aaKnown RBP7.06□□□□□ -1.28
SHO1YER118C GLN4P13188 809 aaKnown RBP7.06□□□□□ -1.28
SHO1YER118C BCK2P33306 851 aa7.06□□□□□ -1.28
SHO1YER118C TEF4P36008 412 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms