RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C TAF1P46677 1066 aa1.56□□□□□ -2.16
SWI4YER111C CTH1P47976 325 aa1.56□□□□□ -2.16
SWI4YER111C PAP2P53632 584 aaKnown RBP1.56□□□□□ -2.16
SWI4YER111C SQS1P53866 767 aaKnown RBP1.56□□□□□ -2.16
SWI4YER111C OMS1Q06668 471 aa1.56□□□□□ -2.16
SWI4YER111C CDA1Q06702 301 aa1.56□□□□□ -2.16
SWI4YER111C PSR2Q07949 397 aa1.56□□□□□ -2.16
SWI4YER111C YDR215CQ12240 137 aa1.56□□□□□ -2.16
SWI4YER111C NKP1Q12493 238 aa1.56□□□□□ -2.16
SWI4YER111C BUD4P47136 1447 aa1.56□□□□□ -2.16
SWI4YER111C RPS17AP02407 136 aaKnown RBP1.56□□□□□ -2.16
SWI4YER111C RPS9BP05755 195 aaKnown RBP1.56□□□□□ -2.16
SWI4YER111C SPE1P08432 466 aa1.56□□□□□ -2.16
SWI4YER111C RPS17BP14127 136 aaKnown RBP1.56□□□□□ -2.16
SWI4YER111C PHO3P24031 467 aa1.56□□□□□ -2.16
SWI4YER111C HXT4P32467 576 aa1.56□□□□□ -2.16
SWI4YER111C BEM3P32873 1128 aa1.56□□□□□ -2.16
SWI4YER111C APT2P36973 181 aa1.56□□□□□ -2.16
SWI4YER111C VHR1P40522 640 aa1.56□□□□□ -2.16
SWI4YER111C AIM21P40563 679 aa1.56□□□□□ -2.16
SWI4YER111C SAP185P40856 1058 aa1.56□□□□□ -2.16
SWI4YER111C QRI7P43122 407 aa1.56□□□□□ -2.16
SWI4YER111C SET2P46995 733 aaKnown RBP1.56□□□□□ -2.16
SWI4YER111C PKH1Q03407 766 aa1.56□□□□□ -2.16
SWI4YER111C YLR407WQ06070 228 aa1.56□□□□□ -2.16
SWI4YER111C BLS1Q06071 122 aa1.56□□□□□ -2.16
SWI4YER111C COG4Q06096 861 aa1.56□□□□□ -2.16
SWI4YER111C THI21Q08975 551 aa1.56□□□□□ -2.16
SWI4YER111C DCS2Q12123 353 aa1.56□□□□□ -2.16
SWI4YER111C YLR122CQ12312 125 aa1.56□□□□□ -2.16
SWI4YER111C SNF2P22082 1703 aa1.56□□□□□ -2.16
SWI4YER111C TY1B-HO13535 1793 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-DR5P0C2I2 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-DR6P0C2I3 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-LR2P0C2I5 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-LR3P0C2I6 1755 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C TY1B-PR1P0C2I9 1755 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C TY1B-PR2P0C2J0 1756 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-PR3P0C2J1 1755 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C TY1B-JR1P47098 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-ML2Q03434 1755 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C TY1B-ER1Q03612 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-ML1Q04711 1755 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C TY1B-GR2Q12269 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-OLQ12273 1755 aa1.55□□□□□ -2.16
SWI4YER111C TY1B-PLQ12414 1755 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C NUC1P08466 329 aa1.55□□□□□ -2.16
SWI4YER111C PFK2P16862 959 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SWI4YER111C YCK2P23292 546 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C ACA1P39970 489 aa1.55□□□□□ -2.16
SWI4YER111C ERR3P42222 437 aa1.55□□□□□ -2.16
SWI4YER111C YFL066CP43538 392 aa1.55□□□□□ -2.16
SWI4YER111C PRP31P49704 494 aaPredicted RBP1.55□□□□□ -2.16
SWI4YER111C BRE5P53741 515 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C MSC2Q03455 724 aa1.55□□□□□ -2.16
SWI4YER111C NOP56Q12460 504 aaKnown RBP RIP-Chip data1.55□□□□□ -2.16not detected
SWI4YER111C DOP1Q03921 1698 aa1.55□□□□□ -2.16
SWI4YER111C YEL076C-AP0CX16 216 aa1.55□□□□□ -2.16
SWI4YER111C YLR464WP0CX17 216 aa1.55□□□□□ -2.16
SWI4YER111C PYC1P11154 1178 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C IMG2P25642 146 aaPredicted RBP1.55□□□□□ -2.16
SWI4YER111C LRG1P35688 1017 aa1.55□□□□□ -2.16
SWI4YER111C NOC2P39744 710 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C YEL076CP39971 216 aa1.55□□□□□ -2.16
SWI4YER111C IES5P40060 125 aa1.55□□□□□ -2.16
SWI4YER111C YNL195CP40168 261 aa1.55□□□□□ -2.16
SWI4YER111C MND2P40577 368 aa1.55□□□□□ -2.16
SWI4YER111C GTR1Q00582 310 aa1.55□□□□□ -2.16
SWI4YER111C LEE1Q02799 301 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C YRF1-2P40105 1681 aa1.55□□□□□ -2.16
SWI4YER111C SWI6P09959 803 aa1.55□□□□□ -2.16
SWI4YER111C LIP5P32875 414 aa1.55□□□□□ -2.16
SWI4YER111C SLC1P33333 303 aa1.55□□□□□ -2.16
SWI4YER111C APM3P38153 483 aa1.55□□□□□ -2.16
SWI4YER111C TOS1P38288 455 aa1.55□□□□□ -2.16
SWI4YER111C SSZ1P38788 538 aaKnown RBP1.55□□□□□ -2.16
SWI4YER111C MSS4P38994 779 aa1.55□□□□□ -2.16
SWI4YER111C SDP1P40479 209 aa1.55□□□□□ -2.16
SWI4YER111C PFA3P42836 336 aa1.55□□□□□ -2.16
SWI4YER111C NOP15P53927 220 aaPredicted RBP1.55□□□□□ -2.16
SWI4YER111C YML131WQ03102 365 aa1.55□□□□□ -2.16
SWI4YER111C MUS81Q04149 632 aaPredicted RBP1.55□□□□□ -2.16
SWI4YER111C ENT1Q12518 454 aa1.55□□□□□ -2.16
SWI4YER111C RPP2AP05319 106 aaKnown RBP1.54□□□□□ -2.16
SWI4YER111C CBP3P21560 335 aa1.54□□□□□ -2.16
SWI4YER111C TGL1P34163 548 aa1.54□□□□□ -2.16
SWI4YER111C JNM1P36224 373 aa1.54□□□□□ -2.16
SWI4YER111C AKL1P38080 1108 aaKnown RBP1.54□□□□□ -2.16
SWI4YER111C MIP6P38760 659 aaKnown RBP1.54□□□□□ -2.16
SWI4YER111C UME6P39001 836 aa1.54□□□□□ -2.16
SWI4YER111C STL1P39932 569 aa1.54□□□□□ -2.16
SWI4YER111C PSF2P40359 213 aa1.54□□□□□ -2.16
SWI4YER111C MAD3P47074 515 aa1.54□□□□□ -2.16
SWI4YER111C CNM67P53865 581 aaKnown RBP1.54□□□□□ -2.16
SWI4YER111C ARP4P80428 489 aa1.54□□□□□ -2.16
SWI4YER111C NRG1Q03125 231 aa1.54□□□□□ -2.16
SWI4YER111C STP4Q07351 490 aa1.54□□□□□ -2.16
SWI4YER111C PEX19Q07418 342 aa1.54□□□□□ -2.16
SWI4YER111C GPB1Q08886 897 aa1.54□□□□□ -2.16
SWI4YER111C HOS1Q12214 470 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 78.8 ms