RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SKY1	Q03656	742 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	TIF35	Q04067	274 aa	Known RBP	7.71	□□□□□ -1.18
SKP1	YDR328C	TRE1	Q08919	783 aa		7.71	□□□□□ -1.18
SKP1	YDR328C	ADE3	P07245	946 aa	Known RBP	7.7	□□□□□ -1.18
SKP1	YDR328C	VBA3	P25594	458 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	PAP1	P29468	568 aa	Known RBP	7.7	□□□□□ -1.18
SKP1	YDR328C	KDX1	P36005	433 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	VBA5	P36172	582 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	MRPL7	P36519	292 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	TBS1	P38114	1094 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	REI1	P38344	393 aa	Predicted RBP	7.7	□□□□□ -1.18
SKP1	YDR328C	HIS2	P38635	335 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	GEM1	P39722	662 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	SPC72	P39723	622 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	ASG1	P40467	964 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	OPT1	P40897	799 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	YJR054W	P47114	497 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	JJJ1	P53863	590 aa		7.7	□□□□□ -1.18
SKP1	YDR328C	GPD1	Q00055	391 aa	Known RBP	7.7	□□□□□ -1.18
SKP1	YDR328C	PKH2	Q12236	1081 aa	Known RBP	7.7	□□□□□ -1.18
SKP1	YDR328C	GAL80	P04387	435 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	HAP2	P06774	265 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	GFA1	P14742	717 aa	Known RBP	7.69	□□□□□ -1.18
SKP1	YDR328C	VPS3	P23643	1011 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	SAT4	P25333	603 aa	Known RBP	7.69	□□□□□ -1.18
SKP1	YDR328C	FRE1	P32791	686 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	RRT2	P38332	387 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	YHR202W	P38887	602 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	YEL075C	P39972	122 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	LCP5	P40079	357 aa	Predicted RBP	7.69	□□□□□ -1.18
SKP1	YDR328C	BRO1	P48582	844 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	SPC98	P53540	846 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	ATG16	Q03818	150 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	YMR114C	Q04471	368 aa	Known RBP	7.69	□□□□□ -1.18
SKP1	YDR328C	YDR278C	Q05612	105 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.69	□□□□□ -1.18	not detected
SKP1	YDR328C	ESC8	Q08119	714 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	REC8	Q12188	680 aa		7.69	□□□□□ -1.18
SKP1	YDR328C	YLR462W	O13556	202 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	MSD1	P15179	658 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	VMA4	P22203	233 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	SPT5	P27692	1063 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	GAC1	P28006	793 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	ABD1	P32783	436 aa	Predicted RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	GYP6	P32806	458 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	SLA2	P33338	968 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	YBL036C	P38197	257 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	CBR1	P38626	284 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	YHL049C	P38722	271 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	QNS1	P38795	714 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	PMC1	P38929	1173 aa	Predicted RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	YEL023C	P39992	682 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	YER189W	P40104	122 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	YFL064C	P43540	174 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	SNZ3	P43545	298 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	ASG7	P46993	209 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	SNZ2	P53824	298 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	DIS3	Q08162	1001 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	SDH5	Q08230	162 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	VPS54	Q12071	889 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	SPO21	Q12411	609 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	YBL111C	Q3E7Y5	667 aa		7.68	□□□□□ -1.18
SKP1	YDR328C	NOP14	Q99207	810 aa	Known RBP	7.68	□□□□□ -1.18
SKP1	YDR328C	JIP3	O13555	125 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	CIT2	P08679	460 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	ADK2	P26364	225 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	DBF4	P32325	704 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	RRP1	P35178	278 aa	Predicted RBP	7.67	□□□□□ -1.18
SKP1	YDR328C	BYE1	P36106	594 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	HMT1	P38074	348 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	SHE3	P38272	425 aa	Known RBP	7.67	□□□□□ -1.18
SKP1	YDR328C	XDJ1	P39102	459 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	SIP5	P40210	489 aa	Known RBP	7.67	□□□□□ -1.18
SKP1	YDR328C	CWC22	P53333	577 aa	Known RBP	7.67	□□□□□ -1.18
SKP1	YDR328C	SLG1	P54867	378 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	SPP1	Q03012	353 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	MUB1	Q03162	620 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	ARO80	Q04052	950 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	SXM1	Q04175	944 aa	Known RBP	7.67	□□□□□ -1.18
SKP1	YDR328C	GYL1	Q04322	720 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	RMP1	Q12530	201 aa		7.67	□□□□□ -1.18
SKP1	YDR328C	PUT4	P15380	627 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	CAP1	P28495	268 aa	Known RBP	7.66	□□□□□ -1.18
SKP1	YDR328C	PEP7	P32609	515 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	GCG1	P32656	232 aa	Known RBP	7.66	□□□□□ -1.18
SKP1	YDR328C	YBL055C	P34220	418 aa	Predicted RBP	7.66	□□□□□ -1.18
SKP1	YDR328C	ABZ1	P37254	787 aa	Predicted RBP	7.66	□□□□□ -1.18
SKP1	YDR328C	CCL1	P37366	393 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	YBR284W	P38150	797 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	APN2	P38207	520 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	RFS1	P38234	210 aa	Known RBP	7.66	□□□□□ -1.18
SKP1	YDR328C	JHD1	P40034	492 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	TMN3	P40071	706 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	MAD1	P40957	749 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	YFL052W	P43551	465 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	YNL011C	P53980	444 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	VTI1	Q04338	217 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	ECI1	Q05871	280 aa		7.66	□□□□□ -1.18
SKP1	YDR328C	YOR059C	Q08448	450 aa	Known RBP	7.66	□□□□□ -1.18
SKP1	YDR328C	SFI1	Q12369	946 aa		7.66	□□□□□ -1.18

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms