RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C FLR1P38124 548 aa5.54□□□□□ -1.52
NUP42YDR192C PZF1P39933 429 aa5.54□□□□□ -1.52
NUP42YDR192C NOP2P40991 618 aaKnown RBP5.54□□□□□ -1.52
NUP42YDR192C GPP1P41277 250 aaKnown RBP5.54□□□□□ -1.52
NUP42YDR192C SSY5P47002 699 aa5.54□□□□□ -1.52
NUP42YDR192C YRB30P53107 440 aaPredicted RBP5.54□□□□□ -1.52
NUP42YDR192C TAP42Q04372 366 aa5.54□□□□□ -1.52
NUP42YDR192C KRE5P22023 1365 aa5.54□□□□□ -1.52
NUP42YDR192C PSK1P31374 1356 aa5.54□□□□□ -1.52
NUP42YDR192C RPS13P05756 151 aaKnown RBP5.53□□□□□ -1.52
NUP42YDR192C CDC6P09119 513 aa5.53□□□□□ -1.52
NUP42YDR192C MAL31P38156 614 aa5.53□□□□□ -1.52
NUP42YDR192C TDA3P38758 523 aa5.53□□□□□ -1.52
NUP42YDR192C NIT1P40447 199 aa5.53□□□□□ -1.52
NUP42YDR192C YGR153WP48238 217 aa5.53□□□□□ -1.52
NUP42YDR192C SPT20P50875 604 aa5.53□□□□□ -1.52
NUP42YDR192C RIM8P53179 542 aa5.53□□□□□ -1.52
NUP42YDR192C SWM1Q12379 170 aa5.53□□□□□ -1.52
NUP42YDR192C TMA17Q12513 150 aa5.53□□□□□ -1.52
NUP42YDR192C MIH1P23748 554 aa5.52□□□□□ -1.53
NUP42YDR192C DID4P36108 232 aa5.52□□□□□ -1.53
NUP42YDR192C YKR051WP36142 418 aa5.52□□□□□ -1.53
NUP42YDR192C YFR016CP43597 1233 aaKnown RBP5.52□□□□□ -1.53
NUP42YDR192C DUG1P43616 481 aaKnown RBP5.52□□□□□ -1.53
NUP42YDR192C MNN11P46985 422 aaKnown RBP5.52□□□□□ -1.53
NUP42YDR192C BFA1P47113 574 aa5.52□□□□□ -1.53
NUP42YDR192C MTR3P48240 250 aaPredicted RBP5.52□□□□□ -1.53
NUP42YDR192C GCV2P49095 1034 aa5.52□□□□□ -1.53
NUP42YDR192C UBC9P50623 157 aaPredicted RBP5.52□□□□□ -1.53
NUP42YDR192C NCS6P53088 359 aa5.52□□□□□ -1.53
NUP42YDR192C PCL10P53124 433 aa5.52□□□□□ -1.53
NUP42YDR192C YAP6Q03935 383 aa5.52□□□□□ -1.53
NUP42YDR192C WHI4Q07655 649 aaKnown RBP5.52□□□□□ -1.53
NUP42YDR192C CDC20P26309 610 aa5.51□□□□□ -1.53
NUP42YDR192C STE14P32584 239 aa5.51□□□□□ -1.53
NUP42YDR192C TSA1P34760 196 aaKnown RBP5.51□□□□□ -1.53
NUP42YDR192C OAF1P39720 1047 aaPredicted RBP5.51□□□□□ -1.53
NUP42YDR192C CCT5P40413 562 aaKnown RBP5.51□□□□□ -1.53
NUP42YDR192C YBP2P53169 641 aa5.51□□□□□ -1.53
NUP42YDR192C ORC4P54791 529 aa5.51□□□□□ -1.53
NUP42YDR192C CDC45Q08032 650 aa5.51□□□□□ -1.53
NUP42YDR192C NPC2Q12408 173 aa5.51□□□□□ -1.53
NUP42YDR192C ENT1Q12518 454 aa5.51□□□□□ -1.53
NUP42YDR192C YLR149CQ99296 730 aa5.51□□□□□ -1.53
NUP42YDR192C GAS1P22146 559 aaKnown RBP5.5□□□□□ -1.53
NUP42YDR192C SEG2P34250 1132 aa5.5□□□□□ -1.53
NUP42YDR192C GRX7P38068 203 aa5.5□□□□□ -1.53
NUP42YDR192C YBR071WP38243 211 aa5.5□□□□□ -1.53
NUP42YDR192C VPS27P40343 622 aaKnown RBP5.5□□□□□ -1.53
NUP42YDR192C ASI2P53895 289 aa5.5□□□□□ -1.53
NUP42YDR192C GPD1Q00055 391 aaKnown RBP5.5□□□□□ -1.53
NUP42YDR192C PKH1Q03407 766 aa5.5□□□□□ -1.53
NUP42YDR192C EUG1P32474 517 aa5.49□□□□□ -1.53
NUP42YDR192C YKR075CP36155 307 aa5.49□□□□□ -1.53
NUP42YDR192C MIP6P38760 659 aaKnown RBP5.49□□□□□ -1.53
NUP42YDR192C SAK1P38990 1142 aa5.49□□□□□ -1.53
NUP42YDR192C PAP2P53632 584 aaKnown RBP5.49□□□□□ -1.53
NUP42YDR192C FOL1P53848 824 aa5.49□□□□□ -1.53
NUP42YDR192C YLR224WQ05947 369 aa5.49□□□□□ -1.53
NUP42YDR192C CDA2Q06703 312 aa5.49□□□□□ -1.53
NUP42YDR192C PRP6P19735 899 aaPredicted RBP5.48□□□□□ -1.53
NUP42YDR192C AEP2P22136 580 aa5.48□□□□□ -1.53
NUP42YDR192C STE11P23561 717 aa5.48□□□□□ -1.53
NUP42YDR192C AIM3P38266 947 aaKnown RBP5.48□□□□□ -1.53
NUP42YDR192C YJR039WP47107 1121 aa5.48□□□□□ -1.53
NUP42YDR192C PTA1Q01329 785 aaPredicted RBP5.48□□□□□ -1.53
NUP42YDR192C KCS1Q12494 1050 aa5.48□□□□□ -1.53
NUP42YDR192C RMP1Q12530 201 aa5.48□□□□□ -1.53
NUP42YDR192C YRF1-2P40105 1681 aa5.47□□□□□ -1.53
NUP42YDR192C SEC21P32074 935 aaKnown RBP5.47□□□□□ -1.53
NUP42YDR192C ELM1P32801 640 aa5.47□□□□□ -1.53
NUP42YDR192C APT2P36973 181 aa5.47□□□□□ -1.53
NUP42YDR192C YBR259WP38338 688 aa5.47□□□□□ -1.53
NUP42YDR192C SIC1P38634 284 aa5.47□□□□□ -1.53
NUP42YDR192C PLB1P39105 664 aa5.47□□□□□ -1.53
NUP42YDR192C VHR1P40522 640 aa5.47□□□□□ -1.53
NUP42YDR192C PFA3P42836 336 aa5.47□□□□□ -1.53
NUP42YDR192C MUS81Q04149 632 aaPredicted RBP5.47□□□□□ -1.53
NUP42YDR192C IMH1Q06704 911 aaKnown RBP5.47□□□□□ -1.53
NUP42YDR192C PEX19Q07418 342 aa5.47□□□□□ -1.53
NUP42YDR192C ENB1Q08299 606 aa5.47□□□□□ -1.53
NUP42YDR192C TRM11Q12463 433 aa5.47□□□□□ -1.53
NUP42YDR192C APM4Q99186 491 aa5.47□□□□□ -1.53
NUP42YDR192C Q0142Q9ZZW4 58 aa5.47□□□□□ -1.53
NUP42YDR192C YLR358CO13565 187 aa5.46□□□□□ -1.54
NUP42YDR192C SSZ1P38788 538 aaKnown RBP5.46□□□□□ -1.54
NUP42YDR192C ECM1P39715 212 aa5.46□□□□□ -1.54
NUP42YDR192C EMP65P40085 556 aa5.46□□□□□ -1.54
NUP42YDR192C PEX14P53112 341 aa5.46□□□□□ -1.54
NUP42YDR192C ECM9Q02202 377 aa5.46□□□□□ -1.54
NUP42YDR192C TMA7Q3E764 64 aaKnown RBP5.46□□□□□ -1.54
NUP42YDR192C NUP192P47054 1683 aa5.45□□□□□ -1.54
NUP42YDR192C YLR415CO13578 112 aa5.45□□□□□ -1.54
NUP42YDR192C PRE10P21242 288 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
NUP42YDR192C PRS1P32895 427 aaKnown RBP5.45□□□□□ -1.54
NUP42YDR192C MNN4P36044 1178 aa5.45□□□□□ -1.54
NUP42YDR192C RTR1P40084 226 aaPredicted RBP5.45□□□□□ -1.54
NUP42YDR192C COG6P53959 839 aa5.45□□□□□ -1.54
NUP42YDR192C CTF4Q01454 927 aa5.45□□□□□ -1.54
NUP42YDR192C DCS2Q12123 353 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms