RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C CIT2P08679 460 aa3.93□□□□□ -1.78
RPB5YBR154C HOM2P13663 365 aaKnown RBP3.93□□□□□ -1.78
RPB5YBR154C THR1P17423 357 aaKnown RBP3.93□□□□□ -1.78
RPB5YBR154C VPS34P22543 875 aa3.93□□□□□ -1.78
RPB5YBR154C PEX1P24004 1043 aa3.93□□□□□ -1.78
RPB5YBR154C KCC4P25389 1037 aa3.93□□□□□ -1.78
RPB5YBR154C FUB1P25659 250 aa3.93□□□□□ -1.78
RPB5YBR154C SEC5P89102 971 aa3.93□□□□□ -1.78
RPB5YBR154C HMO1Q03973 246 aaKnown RBP3.93□□□□□ -1.78
RPB5YBR154C NHX1Q04121 633 aa3.93□□□□□ -1.78
RPB5YBR154C YAP7Q08182 245 aa3.93□□□□□ -1.78
RPB5YBR154C MDM12Q92328 271 aa3.93□□□□□ -1.78
RPB5YBR154C Q0142Q9ZZW4 58 aa3.93□□□□□ -1.78
RPB5YBR154C ERG6P25087 383 aaKnown RBP3.92□□□□□ -1.78
RPB5YBR154C YKR018CP36114 725 aa3.92□□□□□ -1.78
RPB5YBR154C GET2P40056 285 aa3.92□□□□□ -1.78
RPB5YBR154C GLO1P50107 326 aa3.92□□□□□ -1.78
RPB5YBR154C PCL10P53124 433 aa3.92□□□□□ -1.78
RPB5YBR154C COX18P53239 316 aa3.92□□□□□ -1.78
RPB5YBR154C CDC9P04819 755 aa3.91□□□□□ -1.78
RPB5YBR154C PRP28P23394 588 aa3.91□□□□□ -1.78
RPB5YBR154C YKR051WP36142 418 aa3.91□□□□□ -1.78
RPB5YBR154C PIG2P40187 538 aa3.91□□□□□ -1.78
RPB5YBR154C GID8P40208 455 aa3.91□□□□□ -1.78
RPB5YBR154C SEG1Q04279 960 aa3.91□□□□□ -1.78
RPB5YBR154C ERR1P0CX10 437 aa3.9□□□□□ -1.79
RPB5YBR154C ERR2P0CX11 437 aa3.9□□□□□ -1.79
RPB5YBR154C RPA135P22138 1203 aaKnown RBP3.9□□□□□ -1.79
RPB5YBR154C SRP40P32583 406 aaPredicted RBP3.9□□□□□ -1.79
RPB5YBR154C TMT1P32643 299 aa3.9□□□□□ -1.79
RPB5YBR154C DOT6P40059 670 aaKnown RBP3.9□□□□□ -1.79
RPB5YBR154C MAL11P53048 616 aa3.9□□□□□ -1.79
RPB5YBR154C SPC98P53540 846 aa3.9□□□□□ -1.79
RPB5YBR154C YOL098CQ12496 1037 aa3.9□□□□□ -1.79
RPB5YBR154C HOG1P32485 435 aa3.89□□□□□ -1.79
RPB5YBR154C BIT2P38346 545 aa3.89□□□□□ -1.79
RPB5YBR154C DSS1P39112 969 aa3.89□□□□□ -1.79
RPB5YBR154C NOP9P47077 666 aaKnown RBP3.89□□□□□ -1.79
RPB5YBR154C YGR151CP53287 111 aa3.89□□□□□ -1.79
RPB5YBR154C RIM13Q03792 727 aa3.89□□□□□ -1.79
RPB5YBR154C VBA3P25594 458 aa3.88□□□□□ -1.79
RPB5YBR154C BCS1P32839 456 aa3.88□□□□□ -1.79
RPB5YBR154C SET3P36124 751 aa3.88□□□□□ -1.79
RPB5YBR154C APN2P38207 520 aa3.88□□□□□ -1.79
RPB5YBR154C RSC8P43609 557 aaKnown RBP3.88□□□□□ -1.79
RPB5YBR154C RPN4Q03465 531 aa3.88□□□□□ -1.79
RPB5YBR154C THI22Q06490 572 aa3.88□□□□□ -1.79
RPB5YBR154C BMS1Q08965 1183 aaKnown RBP3.88□□□□□ -1.79
RPB5YBR154C SRD1P09007 221 aa3.87□□□□□ -1.79
RPB5YBR154C TIM23P32897 222 aa3.87□□□□□ -1.79
RPB5YBR154C SET2P46995 733 aaKnown RBP3.87□□□□□ -1.79
RPB5YBR154C COG8Q04632 607 aa3.87□□□□□ -1.79
RPB5YBR154C RGC1Q06108 1083 aaKnown RBP3.87□□□□□ -1.79
RPB5YBR154C YDL086WQ07505 273 aa3.87□□□□□ -1.79
RPB5YBR154C OSW1Q08692 278 aa3.87□□□□□ -1.79
RPB5YBR154C CHS5Q12114 671 aaKnown RBP3.87□□□□□ -1.79
RPB5YBR154C YLR125WQ12138 136 aa3.87□□□□□ -1.79
RPB5YBR154C ECM3Q99252 613 aa3.87□□□□□ -1.79
RPB5YBR154C SEC15P22224 910 aa3.86□□□□□ -1.79
RPB5YBR154C NTH1P32356 751 aa3.86□□□□□ -1.79
RPB5YBR154C YKL091CP33324 310 aaKnown RBP3.86□□□□□ -1.79
RPB5YBR154C APL3P38065 1025 aa3.86□□□□□ -1.79
RPB5YBR154C ADE5,7P07244 802 aaKnown RBP3.85□□□□□ -1.79
RPB5YBR154C MIH1P23748 554 aa3.85□□□□□ -1.79
RPB5YBR154C PTP1P25044 335 aa3.85□□□□□ -1.79
RPB5YBR154C SAT4P25333 603 aaKnown RBP3.85□□□□□ -1.79
RPB5YBR154C UGP1P32861 499 aaKnown RBP3.85□□□□□ -1.79
RPB5YBR154C KSP1P38691 1029 aaKnown RBP3.85□□□□□ -1.79
RPB5YBR154C LTP1P40347 161 aa3.85□□□□□ -1.79
RPB5YBR154C ARP4P80428 489 aa3.85□□□□□ -1.79
RPB5YBR154C GPD1Q00055 391 aaKnown RBP3.85□□□□□ -1.79
RPB5YBR154C FMP30Q02883 468 aa3.85□□□□□ -1.79
RPB5YBR154C UGO1Q03327 502 aa3.85□□□□□ -1.79
RPB5YBR154C ERG20P08524 352 aaKnown RBP3.84□□□□□ -1.79
RPB5YBR154C ERG11P10614 530 aa3.84□□□□□ -1.79
RPB5YBR154C RAD18P10862 487 aa3.84□□□□□ -1.79
RPB5YBR154C STE12P13574 688 aa3.84□□□□□ -1.79
RPB5YBR154C YEL1P34225 687 aa3.84□□□□□ -1.79
RPB5YBR154C YMC2P38087 329 aa3.84□□□□□ -1.79
RPB5YBR154C CTP1P38152 299 aa3.84□□□□□ -1.79
RPB5YBR154C MPS3P47069 682 aa3.84□□□□□ -1.79
RPB5YBR154C YSH1Q06224 779 aaPredicted RBP3.84□□□□□ -1.79
RPB5YBR154C PHO8P11491 566 aa3.83□□□□□ -1.8
RPB5YBR154C MEF1P25039 761 aa3.83□□□□□ -1.8
RPB5YBR154C FEN2P25621 512 aaKnown RBP3.83□□□□□ -1.8
RPB5YBR154C SEC6P32844 805 aa3.83□□□□□ -1.8
RPB5YBR154C PEX6P33760 1030 aa3.83□□□□□ -1.8
RPB5YBR154C PBP2P38151 413 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
RPB5YBR154C SSZ1P38788 538 aaKnown RBP3.83□□□□□ -1.8
RPB5YBR154C PMC1P38929 1173 aaPredicted RBP3.83□□□□□ -1.8
RPB5YBR154C YNL195CP40168 261 aa3.83□□□□□ -1.8
RPB5YBR154C NUP82P40368 713 aa3.83□□□□□ -1.8
RPB5YBR154C BNA3P47039 444 aaKnown RBP3.83□□□□□ -1.8
RPB5YBR154C ORC1P54784 914 aaPredicted RBP3.83□□□□□ -1.8
RPB5YBR154C ISA1Q07821 250 aaPredicted RBP3.83□□□□□ -1.8
RPB5YBR154C MDM20Q12387 796 aaKnown RBP3.83□□□□□ -1.8
RPB5YBR154C POM34Q12445 299 aa3.83□□□□□ -1.8
RPB5YBR154C LAM4P38800 1345 aa3.82□□□□□ -1.8
RPB5YBR154C PGK1P00560 416 aaKnown RBP3.82□□□□□ -1.8
RPB5YBR154C MSH2P25847 964 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms