RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MEI1Q5TIA1 1274 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 C16orf46Q6P387 395 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 SPNS2Q8IVW8 549 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 HNRNPLLQ8WVV9 542 aaKnown RBP9.48□□□□□ -0.89
NECAP1-220ENST00000639841 SEC16BQ96JE7 1060 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 SCUBE2Q9NQ36 999 aa9.48□□□□□ -0.89
NECAP1-220ENST00000639841 SETD5Q9C0A6 1442 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 NHSL1Q5SYE7 1610 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 TKFCQ3LXA3 575 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 BRDTQ58F21 947 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-220ENST00000639841 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.47□□□□□ -0.89
NECAP1-220ENST00000639841 ZNF512BQ96KM6 892 aaPredicted RBP9.47□□□□□ -0.89
NECAP1-220ENST00000639841 CEP89Q96ST8 783 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 MPHOSPH6Q99547 160 aaKnown RBP9.47□□□□□ -0.89
NECAP1-220ENST00000639841 SENP7Q9BQF6 1050 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 SFMBT1Q9UHJ3 866 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 ROCK1Q13464 1354 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 SETBP1Q9Y6X0 1596 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 MYO5BQ9ULV0 1848 aa9.47□□□□□ -0.89
NECAP1-220ENST00000639841 RXRBP28702 533 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 FAM26DQ5JW98 314 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 RNF20Q5VTR2 975 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 ALKBH2Q6NS38 261 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 ERMP1Q7Z2K6 904 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 GJD3Q8N144 294 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 TRIM55Q9BYV6 548 aa9.46□□□□□ -0.89
NECAP1-220ENST00000639841 ZBTB39O15060 712 aa9.46□□□□□ -0.9
NECAP1-220ENST00000639841 RGS20O76081 388 aa9.46□□□□□ -0.9
NECAP1-220ENST00000639841 EXOSC10Q01780 885 aaKnown RBP9.46□□□□□ -0.9
NECAP1-220ENST00000639841 ATCAYQ86WG3 371 aa9.46□□□□□ -0.9
NECAP1-220ENST00000639841 NAP1L5Q96NT1 182 aaPredicted RBP9.46□□□□□ -0.9
NECAP1-220ENST00000639841 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.9
NECAP1-220ENST00000639841 ADAMTS13Q76LX8 1427 aa9.46□□□□□ -0.9
NECAP1-220ENST00000639841 LRP6O75581 1613 aa9.45□□□□□ -0.9
NECAP1-220ENST00000639841 CCDC85CA6NKD9 419 aa9.45□□□□□ -0.9
NECAP1-220ENST00000639841 CFHP08603 1231 aa9.45□□□□□ -0.9
NECAP1-220ENST00000639841 POU3F3P20264 500 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-220ENST00000639841 NASPP49321 788 aaPredicted RBP9.45□□□□□ -0.9
NECAP1-220ENST00000639841 SYCP2LQ5T4T6 812 aa9.45□□□□□ -0.9
NECAP1-220ENST00000639841 ASXL1Q8IXJ9 1541 aa9.45□□□□□ -0.9
NECAP1-220ENST00000639841 OPLAHO14841 1288 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 EIF4BP23588 611 aaKnown RBP9.44□□□□□ -0.9
NECAP1-220ENST00000639841 SQSTM1Q13501 440 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 NFE2Q16621 373 aaPredicted RBP9.44□□□□□ -0.9
NECAP1-220ENST00000639841 LRP10Q7Z4F1 713 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 DNAJC7Q99615 494 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 TMEM260Q9NX78 707 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 STIM2Q9P246 746 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 SLC27A5Q9Y2P5 690 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 LAMC1P11047 1609 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 E9PCH4 1651 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 PROX2Q3B8N5 592 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 MORN1Q5T089 497 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 HOMER1Q86YM7 354 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 TRPM4Q8TD43 1214 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 SCG3Q8WXD2 468 aaKnown RBP9.44□□□□□ -0.9
NECAP1-220ENST00000639841 LRRC59Q96AG4 307 aaKnown RBP9.44□□□□□ -0.9
NECAP1-220ENST00000639841 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
NECAP1-220ENST00000639841 TSPAN6O43657 245 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 NUDT7P0C024 238 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 ORC1Q13415 861 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 ZNF358Q9NW07 568 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 NOS2P35228 1153 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 SAFB2Q14151 953 aaKnown RBP eCLIP9.43□□□□□ -0.9
NECAP1-220ENST00000639841 COX20Q5RI15 118 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 CNPY4Q8N129 248 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 KHSRPQ92945 711 aaKnown RBP eCLIP9.43□□□□□ -0.93e-8■■■■□ 26.1
NECAP1-220ENST00000639841 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 FBXO9Q9UK97 447 aaPredicted RBP9.43□□□□□ -0.9
NECAP1-220ENST00000639841 POLIQ9UNA4 740 aa9.43□□□□□ -0.9
NECAP1-220ENST00000639841 ADGRL3Q9HAR2 1447 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 ATMINO43313 823 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-220ENST00000639841 LRRC41Q15345 812 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 EMID1Q96A84 441 aaPredicted RBP9.42□□□□□ -0.9
NECAP1-220ENST00000639841 FEZ1Q99689 392 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 ARNT2Q9HBZ2 717 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 ATAD2Q6PL18 1390 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 PTCH1Q13635 1447 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 PRAG1Q86YV5 1406 aa9.42□□□□□ -0.9
NECAP1-220ENST00000639841 IFRD1O00458 451 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-220ENST00000639841 CTHP32929 405 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 RBM6P78332 1123 aaKnown RBP9.41□□□□□ -0.9
NECAP1-220ENST00000639841 FAM43BQ6ZT52 329 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-220ENST00000639841 ARPC5LQ9BPX5 153 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 SPG7Q9UQ90 795 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 FGAP02671 866 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 PTPRNQ16849 979 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 PUS10Q3MIT2 529 aaKnown RBP9.41□□□□□ -0.9
NECAP1-220ENST00000639841 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 BRINP3Q76B58 766 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 KRT26Q7Z3Y9 468 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.9
NECAP1-220ENST00000639841 OSBPL7Q9BZF2 842 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 AVENQ9NQS1 362 aaPredicted RBP9.41□□□□□ -0.9
NECAP1-220ENST00000639841 ATP8A1Q9Y2Q0 1164 aa9.41□□□□□ -0.9
NECAP1-220ENST00000639841 LEMD3Q9Y2U8 911 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms