RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	ZNF521	Q96K83	1311 aa		4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	TLL1	O43897	1013 aa		4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	SNRPA1	P09661	255 aa	Known RBP	4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	IL6ST	P40189	918 aa	Predicted RBP	4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	RIPK4	P57078	832 aa		4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	EZH2	Q15910	746 aa	Known RBP	4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	CSPP1	Q1MSJ5	1256 aa		4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	SPIRE2	Q8WWL2	714 aa		4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	VRTN	Q9H8Y1	702 aa		4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	NXF1	Q9UBU9	619 aa	Known RBP	4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.64	□□□□□ -1.67
LGI1-222	ENST00000636754	N4BP2	Q86UW6	1770 aa	Predicted RBP	4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	AP1G2	O75843	785 aa		4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	SNRPB	P14678	240 aa	Known RBP	4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	QPCT	Q16769	361 aa		4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	MTFR1L	Q9H019	292 aa		4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	MYH16	Q9H6N6	1097 aa		4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	CCDC87	Q9NVE4	849 aa		4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	RBM27	Q9P2N5	1060 aa	Known RBP	4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	ATP10D	Q9P241	1426 aa		4.63	□□□□□ -1.67
LGI1-222	ENST00000636754	TMEM88B	A6NKF7	163 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	KCNQ2	O43526	872 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	DIEXF	Q68CQ4	756 aa	Known RBP	4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	CLEC4G	Q6UXB4	293 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	MPRIP	Q6WCQ1	1025 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	NFATC2IP	Q8NCF5	419 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	ANKRD36C	Q5JPF3	1778 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	PXDNL	A1KZ92	1463 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	PALM3	A6NDB9	673 aa	Predicted RBP	4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	ERVV-1	B6SEH8	477 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	CYP19A1	P11511	503 aa	Predicted RBP	4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	CDK11B	P21127	795 aa	Known RBP	4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	LMOD1	P29536	600 aa	Predicted RBP	4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	EIF4A1	P60842	406 aa	Known RBP	4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	ACSBG1	Q96GR2	724 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	LGR6	Q9HBX8	967 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	ATP13A2	Q9NQ11	1180 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	IGSF5	Q9NSI5	407 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	ADGRG1	Q9Y653	693 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	ARFGEF2	Q9Y6D5	1785 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	PNPLA7	Q6ZV29	1317 aa		4.62	□□□□□ -1.67
LGI1-222	ENST00000636754	LAMB2	P55268	1798 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	DLEC1	Q9Y238	1755 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	SPTLC1	O15269	473 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	ATP6V1A	P38606	617 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	EIF5	P55010	431 aa	Known RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	TUSC1	Q2TAM9	212 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	PADI6	Q6TGC4	694 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	CYP4X1	Q8N118	509 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	NLGN1	Q8N2Q7	840 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	KRTAP4-12	Q9BQ66	201 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	LRRC4B	Q9NT99	713 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	ASAP1	Q9ULH1	1129 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	RTCB	Q9Y3I0	505 aa	Known RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	COL15A1	P39059	1388 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	C10orf71	Q711Q0	1435 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	LILRB3	O75022	631 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	GIGYF1	O75420	1035 aa	Predicted RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	USP17L8	P0C7I0	530 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	ITPK1	Q13572	414 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	HSP90AB3P	Q58FF7	597 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	RTL5	Q5HYW3	569 aa	Predicted RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	RSBN1L	Q6PCB5	846 aa	Predicted RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	DEFB132	Q7Z7B7	95 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	LINC00116	Q8NCU8	138 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	SYTL4	Q96C24	671 aa	Predicted RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	KRTAP9-9	Q9BYP9	154 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	KRTAP9-4	Q9BYQ2	154 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	SPON1	Q9HCB6	807 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	TOR4A	Q9NXH8	423 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	PKD2L1	Q9P0L9	805 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	NARF	Q9UHQ1	456 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	TSPYL4	Q9UJ04	414 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	ZNF652	Q9Y2D9	606 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	PCDHB15	Q9Y5E8	787 aa		4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	MYH14	Q7Z406	1995 aa	Known RBP	4.61	□□□□□ -1.67
LGI1-222	ENST00000636754	USP42	Q9H9J4	1324 aa	Known RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	RBM47	A0AV96	593 aa	Known RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	MOXD2P	A6NHM9	499 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	APAF1	O14727	1248 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	POLD1	P28340	1107 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	CRKL	P46109	303 aa	Known RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	TRAPPC3L	Q5T215	181 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	INTS5	Q6P9B9	1019 aa	Known RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	TRMT2A	Q8IZ69	625 aa	Known RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	ZNF496	Q96IT1	587 aa	Predicted RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	HYPK	Q9NX55	129 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	CD2AP	Q9Y5K6	639 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	ZBED9	Q6R2W3	1325 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754		H3BM21	787 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	GPR37L1	O60883	481 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	ADH1B	P00325	375 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	VAC14	Q08AM6	782 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	ZNF827	Q17R98	1081 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	WASHC4	Q2M389	1173 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	GRIPAP1	Q4V328	841 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	SLC4A9	Q96Q91	983 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	SLC6A16	Q9GZN6	736 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	DDX21	Q9NR30	783 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	TFIP11	Q9UBB9	837 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms