RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 SDF4Q9BRK5 362 aa16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 STRN4Q9NRL3 753 aa16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 USP27XA6NNY8 438 aa16.47■□□□□ 0.23
CACNA1A-228ENST00000636610 A0A0G2JS52 829 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 SCARF1Q14162 830 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 CCDC73Q6ZRK6 1079 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 TOM1L2Q6ZVM7 507 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 CFAP45Q9UL16 551 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 MAST3O60307 1309 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 KINO60870 393 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 TNNT1P13805 278 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 SF3A1Q15459 793 aaKnown RBP16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 ATP2B3Q16720 1220 aa16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 CWC25Q9NXE8 425 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
CACNA1A-228ENST00000636610 GPTP24298 496 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 U2AF2P26368 475 aaKnown RBP eCLIP16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 ADD1P35611 737 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 PDIA3P30101 505 aaKnown RBP16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 RABL6Q3YEC7 729 aaPredicted RBP16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 TAF7LQ5H9L4 462 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 AOPEPQ8N6M6 819 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 PFKFB2O60825 505 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 CASP7P55210 303 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 MAP7D2Q96T17 732 aa16.45■□□□□ 0.22
CACNA1A-228ENST00000636610 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
CACNA1A-228ENST00000636610 C19orf44Q9H6X5 657 aa16.44■□□□□ 0.22
CACNA1A-228ENST00000636610 CLIC4Q9Y696 253 aa16.44■□□□□ 0.22
CACNA1A-228ENST00000636610 APPP05067 770 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 MARCKSP29966 332 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 TTC39AQ5SRH9 613 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 N4BP2Q86UW6 1770 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 PDCL2Q8N4E4 241 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 INCENPQ9NQS7 918 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 PLA2G4DQ86XP0 818 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 NKX2-3Q8TAU0 364 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 ZSCAN16Q9H4T2 348 aaPredicted RBP16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 PCDHA7Q9UN72 937 aa16.43■□□□□ 0.22
CACNA1A-228ENST00000636610 KLF18A0A0U1RQI7 1052 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 EYA2O00167 538 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 ZAP70P43403 619 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 SNW1Q13573 536 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 HSP90AA4PQ58FG1 418 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 TDRD7Q8NHU6 1098 aaKnown RBP16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 GOLGA8BA8MQT2 603 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 STK38Q15208 465 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 CCDC94Q9BW85 323 aaPredicted RBP16.42■□□□□ 0.22
CACNA1A-228ENST00000636610 H7C1W4 665 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 CPLX1O14810 134 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 NDUFA8P51970 172 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 SMARCC2Q8TAQ2 1214 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 UBE2Q2LH0YL09 131 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 SNAP23O00161 211 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 FGAP02671 866 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 EXOSC10Q01780 885 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 IQCB1Q15051 598 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 XAGE2Q96GT9 111 aa16.41■□□□□ 0.22
CACNA1A-228ENST00000636610 HELBQ8NG08 1087 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 MYL10Q9BUA6 226 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 PRC1O43663 620 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 SKILP12757 684 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 ZRSR1Q15695 479 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 CCDC82Q8N4S0 544 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 ORC3Q9UBD5 711 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 SMC2O95347 1197 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 DPCR1Q3MIW9 517 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 RCOR1Q9UKL0 485 aa16.4■□□□□ 0.22
CACNA1A-228ENST00000636610 IDH1O75874 414 aaKnown RBP16.39■□□□□ 0.21
CACNA1A-228ENST00000636610 STX1AQ16623 288 aa16.39■□□□□ 0.21
CACNA1A-228ENST00000636610 C5P01031 1676 aa16.39■□□□□ 0.21
CACNA1A-228ENST00000636610 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
CACNA1A-228ENST00000636610 TPM3P06753 285 aa16.39■□□□□ 0.21
CACNA1A-228ENST00000636610 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
CACNA1A-228ENST00000636610 C1orf167Q5SNV9 1468 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 CCDC69A6NI79 296 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 CCDC158Q5M9N0 1113 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 PHKBQ93100 1093 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 SENP2Q9HC62 589 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 KIF28PB7ZC32 967 aa16.38■□□□□ 0.21
CACNA1A-228ENST00000636610 HMGB1P09429 215 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms