RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 B4E1Z4 1266 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 MBD4O95243 580 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 GCKRQ14397 625 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 TMCO3Q6UWJ1 677 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 DHX58Q96C10 678 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 A0A1B0GVL5 298 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 SGSM2O43147 1006 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 ITGA6P23229 1130 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.32■□□□□ 0.2
GABRB3-219ENST00000636466 V9GYY5 206 aaPredicted RBP16.32■□□□□ 0.2
GABRB3-219ENST00000636466 PRR36Q9H6K5 1346 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 SKILP12757 684 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 LEKR1Q6ZMV7 388 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 SAMD9LQ8IVG5 1584 aa16.32■□□□□ 0.2
GABRB3-219ENST00000636466 PRAMEF22A3QJZ6 481 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 GIGYF1O75420 1035 aaPredicted RBP16.31■□□□□ 0.2
GABRB3-219ENST00000636466 NEFHP12036 1026 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 PLIN2Q99541 437 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 RIMBP2O15034 1052 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 GNG11P61952 73 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 MAGEB6P1A0A0J9YX57 407 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 TAF4BQ92750 862 aa16.31■□□□□ 0.2
GABRB3-219ENST00000636466 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.31■□□□□ 0.2
GABRB3-219ENST00000636466 POLR3GO15318 223 aaPredicted RBP16.3■□□□□ 0.2
GABRB3-219ENST00000636466 SLF2Q8IX21 1173 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 SLC27A2O14975 620 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 PAF1Q8N7H5 531 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 ABCA8O94911 1581 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 RRAGBQ5VZM2 374 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 TPTE2Q6XPS3 522 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 CALML4Q96GE6 196 aa16.3■□□□□ 0.2
GABRB3-219ENST00000636466 USP8P40818 1118 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 SNW1Q13573 536 aaKnown RBP16.29■□□□□ 0.2
GABRB3-219ENST00000636466 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 CCDC178Q5BJE1 867 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 GNPATO15228 680 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 CASQ1P31415 396 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 MYO1BO43795 1136 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 PTGS1P23219 599 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 NOLC1Q14978 699 aaKnown RBP eCLIP16.29■□□□□ 0.2
GABRB3-219ENST00000636466 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 INTS4Q96HW7 963 aaKnown RBP16.29■□□□□ 0.2
GABRB3-219ENST00000636466 GOLGA6L10A6NI86 522 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 RRP9O43818 475 aaKnown RBP16.29■□□□□ 0.2
GABRB3-219ENST00000636466 RBSNQ9H1K0 784 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 CNNM2Q9H8M5 875 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 MYO6Q9UM54 1294 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 SAMM50Q9Y512 469 aa16.29■□□□□ 0.2
GABRB3-219ENST00000636466 PPP1R12BO60237 982 aaPredicted RBP16.28■□□□□ 0.2
GABRB3-219ENST00000636466 TSG101Q99816 390 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 MACROD2A1Z1Q3 448 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
GABRB3-219ENST00000636466 EAF2Q96CJ1 260 aaPredicted RBP16.28■□□□□ 0.2
GABRB3-219ENST00000636466 ERCC6L2Q5T890 1561 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 GCC2Q8IWJ2 1684 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 TRIM75PA6NK02 468 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 YEATS4O95619 227 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 GSDMDP57764 484 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 PKP1Q13835 747 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 UVSSAQ2YD98 709 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 CUL5Q93034 780 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
GABRB3-219ENST00000636466 KIF2AO00139 706 aaPredicted RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 JAK2O60674 1132 aa16.27■□□□□ 0.2
GABRB3-219ENST00000636466 TMTC2Q8N394 836 aa16.27■□□□□ 0.2
GABRB3-219ENST00000636466 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.2
GABRB3-219ENST00000636466 RTCBQ9Y3I0 505 aaKnown RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 FAM98CQ17RN3 349 aaKnown RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 SEC62Q99442 399 aaKnown RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 ABCC4O15439 1325 aa16.27■□□□□ 0.2
GABRB3-219ENST00000636466 GADD45BO75293 160 aaPredicted RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 EIF3JO75822 258 aaKnown RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
GABRB3-219ENST00000636466 SH3TC1Q8TE82 1336 aa16.27■□□□□ 0.19
GABRB3-219ENST00000636466 RTL1A6NKG5 1358 aa16.27■□□□□ 0.19
GABRB3-219ENST00000636466 ERLIN2O94905 339 aa16.27■□□□□ 0.19
GABRB3-219ENST00000636466 NAPAP54920 295 aa16.26■□□□□ 0.19
GABRB3-219ENST00000636466 ST5P78524 1137 aa16.26■□□□□ 0.19
GABRB3-219ENST00000636466 WWC2Q6AWC2 1192 aa16.26■□□□□ 0.19
GABRB3-219ENST00000636466 CCDC12Q8WUD4 166 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-219ENST00000636466 SMARCC1Q92922 1105 aaPredicted RBP16.26■□□□□ 0.19
GABRB3-219ENST00000636466 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
GABRB3-219ENST00000636466 CABP5Q9NP86 173 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms