RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 TLR7Q9NYK1 1049 aaKnown RBP7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 PHF24Q9UPV7 400 aa7.57□□□□□ -1.2
TRAPPC9-216ENST00000634178 SENP3-EIF4A1A0A087X0R7 540 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 MAPTP10636 758 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 HOXD8P13378 290 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 GTF2F1P35269 517 aaKnown RBP eCLIP7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 TNNI2P48788 182 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 CCDC85BQ15834 202 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 PCSK7Q16549 785 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 SV2BQ7L1I2 683 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 HIRIP3Q9BW71 556 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 OXCT2Q9BYC2 517 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 CEP44Q9C0F1 390 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 KANSL3Q9P2N6 904 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 RIMBP3CA6NJZ7 1639 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 RIMBP3BA6NNM3 1639 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 RIMBP3Q9UFD9 1639 aa7.56□□□□□ -1.2
TRAPPC9-216ENST00000634178 DCDC2BA2VCK2 349 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 KIF4AO95239 1232 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 CYP2E1P05181 493 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 NFKB1P19838 968 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 GJA8P48165 433 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 SPEM2Q0P670 501 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 GLIS3Q8NEA6 775 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 GPRASP2Q96D09 838 aa7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 ATXN7L1Q9ULK2 861 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC9-216ENST00000634178 SLC35F4A4IF30 521 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 PTSQ03393 145 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 PEAR1Q5VY43 1037 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 FOXR1Q6PIV2 292 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 C3orf58Q8NDZ4 430 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 OSMRQ99650 979 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 AKAP2Q9Y2D5 859 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 CADPSQ9ULU8 1353 aa7.54□□□□□ -1.2
TRAPPC9-216ENST00000634178 STK10O94804 968 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 NRLP54845 237 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 KRT76Q01546 638 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 PAK2Q13177 524 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 FAM182BQ5T319 152 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 DIEXFQ68CQ4 756 aaKnown RBP7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 CCNJLQ8IV13 435 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 KIAA0825Q8IV33 1275 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 BHMTQ93088 406 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 SPON2Q9BUD6 331 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 RBSNQ9H1K0 784 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 LATS2Q9NRM7 1088 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 KBTBD4Q9NVX7 518 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
TRAPPC9-216ENST00000634178 BNIP3LO60238 219 aa7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 PPFIA3O75145 1194 aa7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 GBP2P32456 591 aaPredicted RBP7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 DHX32Q7L7V1 743 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 NOP9Q86U38 636 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 RASGRP4Q8TDF6 673 aa7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 DHX38Q92620 1227 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 TMEM74Q96NL1 305 aa7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 DNAJC2Q99543 621 aaKnown RBP7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 ABCB6Q9NP58 842 aa7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 NDFIP2Q9NV92 336 aa7.52□□□□□ -1.21
TRAPPC9-216ENST00000634178 ATF4P18848 351 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 RBL2Q08999 1139 aa7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 UBAP2LQ14157 1087 aaKnown RBP7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 RPS26P11Q5JNZ5 115 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 FAM177A1Q8N128 213 aaPredicted RBP7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 TRERF1Q96PN7 1200 aa7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 TCF12Q99081 682 aa7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 ZKSCAN3Q9BRR0 538 aa7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 COPRSQ9NQ92 184 aa7.51□□□□□ -1.21
TRAPPC9-216ENST00000634178 EIF4A3P38919 411 aaKnown RBP7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 COL9A2Q14055 689 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 DBN1Q16643 649 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 CEP120Q8N960 986 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 TMEM102Q8N9M5 508 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 ABHD17AQ96GS6 310 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 BHLHE41Q9C0J9 482 aaPredicted RBP7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 STRN4Q9NRL3 753 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 DZANK1Q9NVP4 752 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 SAMM50Q9Y512 469 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 ARHGEF11O15085 1522 aa7.5□□□□□ -1.21
TRAPPC9-216ENST00000634178 LOC102724428A0A0B4J2F2 783 aa7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 GHRHP01286 108 aa7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 ITPKAP23677 461 aa7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 SIK1P57059 783 aa7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 GPLD1P80108 840 aa7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 STRIP2Q9ULQ0 834 aa7.49□□□□□ -1.21
TRAPPC9-216ENST00000634178 MINDY4BA8MYZ0 360 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 THBS1P07996 1170 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 FGRP09769 529 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 CD33P20138 364 aa7.48□□□□□ -1.21
TRAPPC9-216ENST00000634178 FGFR3P22607 806 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms