RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 SF3B3Q15393 1217 aaKnown RBP17.08■□□□□ 0.32
LIMS4-204ENST00000632897 ZMYM1Q5SVZ6 1142 aa17.08■□□□□ 0.32
LIMS4-204ENST00000632897 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
LIMS4-204ENST00000632897 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
LIMS4-204ENST00000632897 TMX3Q96JJ7 454 aa17.08■□□□□ 0.32
LIMS4-204ENST00000632897 CDC5LQ99459 802 aaKnown RBP17.08■□□□□ 0.32
LIMS4-204ENST00000632897 SGIP1Q9BQI5 828 aa17.08■□□□□ 0.32
LIMS4-204ENST00000632897 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
LIMS4-204ENST00000632897 RNF113AO15541 343 aaKnown RBP17.07■□□□□ 0.32
LIMS4-204ENST00000632897 UQCRFS1P1P0C7P4 283 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 SLC5A1P13866 664 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 ADRA2BP18089 450 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 PSMA5P28066 241 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 INTS4Q96HW7 963 aaKnown RBP17.07■□□□□ 0.32
LIMS4-204ENST00000632897 TTC14Q96N46 770 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 SYT17Q9BSW7 474 aa17.07■□□□□ 0.32
LIMS4-204ENST00000632897 UPF3BQ9BZI7 483 aaKnown RBP17.07■□□□□ 0.32
LIMS4-204ENST00000632897 SLC27A2O14975 620 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 NUCB2P80303 420 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 TSGA10IPQ3SY00 556 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 ERFEQ4G0M1 354 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 ZSWIM6Q9HCJ5 1215 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 C4AP0C0L4 1744 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 RPAP1Q9BWH6 1393 aaPredicted RBP17.06■□□□□ 0.32
LIMS4-204ENST00000632897 CHD4Q14839 1912 aa17.06■□□□□ 0.32
LIMS4-204ENST00000632897 ARID4AP29374 1257 aaPredicted RBP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 FLAD1Q8NFF5 587 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 JAKMIP1Q96N16 626 aaKnown RBP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 SEC31BQ9NQW1 1179 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 CYP46A1Q9Y6A2 500 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 PNPLA7Q6ZV29 1317 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 CASTP20810 708 aaKnown RBP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 FKBP4Q02790 459 aaKnown RBP eCLIP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 KRT32Q14532 448 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 TTF1Q15361 905 aaPredicted RBP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 TRAPPC3LQ5T215 181 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 VPS53Q5VIR6 699 aa17.05■□□□□ 0.32
LIMS4-204ENST00000632897 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
LIMS4-204ENST00000632897 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
LIMS4-204ENST00000632897 MCM4P33991 863 aa17.04■□□□□ 0.32
LIMS4-204ENST00000632897 DSCC1Q9BVC3 393 aa17.04■□□□□ 0.32
LIMS4-204ENST00000632897 RFC4P35249 363 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 MCAMP43121 646 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 ZAP70P43403 619 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 SCARF1Q14162 830 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 CCDC102BQ68D86 513 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 ZSCAN25Q6NSZ9 544 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 RUFY3Q7L099 469 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 NBPF5PQ86XG9 351 aaPredicted RBP17.03■□□□□ 0.32
LIMS4-204ENST00000632897 ANKRD18AQ8IVF6 992 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.03■□□□□ 0.32
LIMS4-204ENST00000632897 AKAP11Q9UKA4 1901 aa17.03■□□□□ 0.32
LIMS4-204ENST00000632897 TPTE2Q6XPS3 522 aa17.02■□□□□ 0.32
LIMS4-204ENST00000632897 TNPO1Q92973 898 aaKnown RBP17.02■□□□□ 0.32
LIMS4-204ENST00000632897 SEC62Q99442 399 aaKnown RBP17.02■□□□□ 0.32
LIMS4-204ENST00000632897 ALDH8A1Q9H2A2 487 aaPredicted RBP17.02■□□□□ 0.32
LIMS4-204ENST00000632897 PDRG1Q9NUG6 133 aa17.02■□□□□ 0.32
LIMS4-204ENST00000632897 LIMCH1Q9UPQ0 1083 aa17.02■□□□□ 0.32
LIMS4-204ENST00000632897 MAST3O60307 1309 aa17.02■□□□□ 0.31
LIMS4-204ENST00000632897 DDX11L8A8MPP1 907 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 PTMSP20962 102 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 AK2P54819 239 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 ADCK5Q3MIX3 580 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 CLEC17AQ6ZS10 378 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 APPBP2Q92624 585 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 ZSCAN31Q96LW9 406 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-204ENST00000632897 BSDC1Q9NW68 430 aaPredicted RBP17.01■□□□□ 0.31
LIMS4-204ENST00000632897 MYH7P12883 1935 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 CARMIL3Q8ND23 1372 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
LIMS4-204ENST00000632897 CYP2E1P05181 493 aaPredicted RBP17■□□□□ 0.31
LIMS4-204ENST00000632897 PHKA1P46020 1223 aa17■□□□□ 0.31
LIMS4-204ENST00000632897 CHRNDQ07001 517 aa17■□□□□ 0.31
LIMS4-204ENST00000632897 SMIM5Q71RC9 77 aa17■□□□□ 0.31
LIMS4-204ENST00000632897 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
LIMS4-204ENST00000632897 ZGPATQ8N5A5 531 aaKnown RBP17■□□□□ 0.31
LIMS4-204ENST00000632897 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
LIMS4-204ENST00000632897 NLRP3Q96P20 1036 aa17■□□□□ 0.31
LIMS4-204ENST00000632897 SH2B1Q9NRF2 756 aaPredicted RBP17■□□□□ 0.31
LIMS4-204ENST00000632897 A0A1B0GUL6 1792 aa17■□□□□ 0.31
LIMS4-204ENST00000632897 CHGBP05060 677 aa16.99■□□□□ 0.31
LIMS4-204ENST00000632897 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
LIMS4-204ENST00000632897 BLOC1S2Q6QNY1 142 aa16.99■□□□□ 0.31
LIMS4-204ENST00000632897 C3orf67Q6ZVT6 689 aa16.99■□□□□ 0.31
LIMS4-204ENST00000632897 KLHL34Q8N239 644 aa16.99■□□□□ 0.31
LIMS4-204ENST00000632897 RPS6KB1P23443 525 aa16.99■□□□□ 0.31
LIMS4-204ENST00000632897 M0R2C6 588 aa16.98■□□□□ 0.31
LIMS4-204ENST00000632897 PHF14O94880 888 aa16.98■□□□□ 0.31
LIMS4-204ENST00000632897 HSPD1P10809 573 aaKnown RBP16.98■□□□□ 0.31
LIMS4-204ENST00000632897 ADD2P35612 726 aa16.98■□□□□ 0.31
LIMS4-204ENST00000632897 UBE4AQ14139 1066 aa16.98■□□□□ 0.31
LIMS4-204ENST00000632897 UBE3CQ15386 1083 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms