RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 KLHL40Q2TBA0 621 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 L1TD1Q5T7N2 865 aaKnown RBP6.63□□□□□ -1.35
NEK3-211ENST00000629912 CCDC102BQ68D86 513 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 NHSQ6T4R5 1651 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 CCDC129Q6ZRS4 1044 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 DHX32Q7L7V1 743 aaKnown RBP6.63□□□□□ -1.35
NEK3-211ENST00000629912 ARAP2Q8WZ64 1704 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 APPBP2Q92624 585 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 OSBP2Q969R2 916 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 CDC5LQ99459 802 aaKnown RBP6.63□□□□□ -1.35
NEK3-211ENST00000629912 MPHOSPH8Q99549 860 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 AGXT2Q9BYV1 514 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.63□□□□□ -1.35
NEK3-211ENST00000629912 BCL2L12Q9HB09 334 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 TPCN1Q9ULQ1 816 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 SMC3Q9UQE7 1217 aa6.63□□□□□ -1.35
NEK3-211ENST00000629912 LAMA4Q16363 1823 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 TAF1LQ8IZX4 1826 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 LY75O60449 1722 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 LRP5O75197 1615 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 ATRNO75882 1429 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 MAST3O60307 1309 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 CHGBP05060 677 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 ZSCAN22P10073 491 aaPredicted RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 SYT1P21579 422 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 HMGB2P26583 209 aaKnown RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 ADD2P35612 726 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 IGHMBP2P38935 993 aaKnown RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 MCAMP43121 646 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 TOB2Q14106 344 aaPredicted RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 ALX1Q15699 326 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 MCTP1Q6DN14 999 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 NOL8Q76FK4 1167 aaKnown RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 CHMP4CQ96CF2 233 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 BCL11BQ9C0K0 894 aaPredicted RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 NYXQ9GZU5 481 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 SEC31BQ9NQW1 1179 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 TRPC5Q9UL62 973 aaPredicted RBP6.62□□□□□ -1.35
NEK3-211ENST00000629912 TAF6LQ9Y6J9 622 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 TCHHQ07283 1943 aa6.62□□□□□ -1.35
NEK3-211ENST00000629912 AFF2P51816 1311 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 E7EWF7 191 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 M0R2C6 588 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 STX6O43752 255 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 PRPF40AO75400 957 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 LARGE1O95461 756 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 PDCP20941 246 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 HSPA1LP34931 641 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 PHKA1P46020 1223 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 EVCP57679 992 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 CACNB1Q02641 598 aaPredicted RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 ST3GAL1Q11201 340 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 UBE4AQ14139 1066 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 WASHC4Q2M389 1173 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 SLFNL1Q499Z3 407 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 ERFEQ4G0M1 354 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 MEX3CQ5U5Q3 659 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 TPTE2Q6XPS3 522 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 PTF1AQ7RTS3 328 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 CCDC83Q8IWF9 413 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 SPATA5Q8NB90 893 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 SETDB2Q96T68 719 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 LARP6Q9BRS8 491 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 LLPHQ9BRT6 129 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 BSDC1Q9NW68 430 aaPredicted RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 CCNL1Q9UK58 526 aaPredicted RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 RTCBQ9Y3I0 505 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 ATP6V1DQ9Y5K8 247 aa6.61□□□□□ -1.35
NEK3-211ENST00000629912 DDX49Q9Y6V7 483 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 MYO5AQ9Y4I1 1855 aaKnown RBP6.61□□□□□ -1.35
NEK3-211ENST00000629912 WDR19Q8NEZ3 1342 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 TCRBV5S4A2TA0A5A2 114 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 GOLGA6L3A6NEY3 463 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 FOXP2O15409 715 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 PFKFB2O60825 505 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 ZPR1O75312 459 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 MBD3O95983 291 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 FGAP02671 866 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 GJB2P29033 226 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 MRE11P49959 708 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 CHRNDQ07001 517 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
NEK3-211ENST00000629912 IMMTQ16891 758 aaKnown RBP6.6□□□□□ -1.35
NEK3-211ENST00000629912 TRAPPC3LQ5T215 181 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 SLC9C2Q5TAH2 1124 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 TBC1D9BQ66K14 1250 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 Q6ZUG5 572 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 STOX1Q6ZVD7 989 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 ANKRD18AQ8IVF6 992 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 SEPT12Q8IYM1 358 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 KLHL34Q8N239 644 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 NECAB1Q8N987 351 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 TMEM87AQ8NBN3 555 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 HELBQ8NG08 1087 aaPredicted RBP6.6□□□□□ -1.35
NEK3-211ENST00000629912 ARHGEF1Q92888 912 aaKnown RBP6.6□□□□□ -1.35
NEK3-211ENST00000629912 ZNF274Q96GC6 653 aaPredicted RBP6.6□□□□□ -1.35
NEK3-211ENST00000629912 NLRP3Q96P20 1036 aa6.6□□□□□ -1.35
NEK3-211ENST00000629912 PUS7LQ9H0K6 701 aaKnown RBP6.6□□□□□ -1.35
NEK3-211ENST00000629912 PIH1D3Q9NQM4 214 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms