RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 CAP1Q01518 475 aa15.65■□□□□ 0.1
CHD2-218ENST00000629346 CRHR2Q13324 411 aa15.65■□□□□ 0.1
CHD2-218ENST00000629346 OGFOD1Q8N543 542 aa15.65■□□□□ 0.1
CHD2-218ENST00000629346 ZNF333Q96JL9 665 aa15.65■□□□□ 0.1
CHD2-218ENST00000629346 ZNF609O15014 1411 aa15.65■□□□□ 0.1
CHD2-218ENST00000629346 DLG5Q8TDM6 1919 aa15.64■□□□□ 0.09
CHD2-218ENST00000629346 IRS4O14654 1257 aaPredicted RBP15.64■□□□□ 0.09
CHD2-218ENST00000629346 PPP2R1AP30153 589 aa15.64■□□□□ 0.09
CHD2-218ENST00000629346 SP3Q02447 781 aa15.64■□□□□ 0.09
CHD2-218ENST00000629346 SLC9C1Q4G0N8 1177 aa15.64■□□□□ 0.09
CHD2-218ENST00000629346 CLMNQ96JQ2 1002 aa15.64■□□□□ 0.09
CHD2-218ENST00000629346 NFE2L2Q16236 605 aa15.63■□□□□ 0.09
CHD2-218ENST00000629346 PODNQ7Z5L7 613 aa15.63■□□□□ 0.09
CHD2-218ENST00000629346 NBPF11Q86T75 865 aa15.63■□□□□ 0.09
CHD2-218ENST00000629346 WNK4Q96J92 1243 aa15.63■□□□□ 0.09
CHD2-218ENST00000629346 WTIPA6NIX2 430 aaPredicted RBP15.62■□□□□ 0.09
CHD2-218ENST00000629346 OTUD7BQ6GQQ9 843 aa15.62■□□□□ 0.09
CHD2-218ENST00000629346 DPF3Q92784 378 aa15.62■□□□□ 0.09
CHD2-218ENST00000629346 CCDC85AQ96PX6 553 aaPredicted RBP15.62■□□□□ 0.09
CHD2-218ENST00000629346 ISCA1Q9BUE6 129 aa15.62■□□□□ 0.09
CHD2-218ENST00000629346 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
CHD2-218ENST00000629346 ZBTB48P10074 688 aaPredicted RBP15.61■□□□□ 0.09
CHD2-218ENST00000629346 ANKRD13DQ6ZTN6 518 aa15.61■□□□□ 0.09
CHD2-218ENST00000629346 APOBEC3FQ8IUX4 373 aaKnown RBP15.61■□□□□ 0.09
CHD2-218ENST00000629346 PLBD2Q8NHP8 589 aa15.61■□□□□ 0.09
CHD2-218ENST00000629346 RANBP2P49792 3224 aaKnown RBP15.6■□□□□ 0.09
CHD2-218ENST00000629346 DACT2Q5SW24 774 aa15.6■□□□□ 0.09
CHD2-218ENST00000629346 PSME4Q14997 1843 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 COL6A3P12111 3177 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 PLEKHF1Q96S99 279 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 PTPN18Q99952 460 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 CHPF2Q9P2E5 772 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 XDHP47989 1333 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 CUL9Q8IWT3 2517 aa15.59■□□□□ 0.09
CHD2-218ENST00000629346 ATP2B4P23634 1241 aa15.58■□□□□ 0.08
CHD2-218ENST00000629346 KRT24Q2M2I5 525 aa15.58■□□□□ 0.08
CHD2-218ENST00000629346 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.08
CHD2-218ENST00000629346 SH3TC2Q8TF17 1288 aa15.58■□□□□ 0.08
CHD2-218ENST00000629346 DEFB129Q9H1M3 183 aa15.58■□□□□ 0.08
CHD2-218ENST00000629346 PPP1R12BO60237 982 aaPredicted RBP15.57■□□□□ 0.08
CHD2-218ENST00000629346 GJA5P36382 358 aa15.57■□□□□ 0.08
CHD2-218ENST00000629346 JARID2Q92833 1246 aaPredicted RBP15.57■□□□□ 0.08
CHD2-218ENST00000629346 ARHGEF6Q15052 776 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 CCDC152Q4G0S7 254 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 STRIP1Q5VSL9 837 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 MYO3BQ8WXR4 1341 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 MAPK8IP3Q9UPT6 1336 aa15.56■□□□□ 0.08
CHD2-218ENST00000629346 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
CHD2-218ENST00000629346 ZBTB38Q8NAP3 1195 aaPredicted RBP15.54■□□□□ 0.08
CHD2-218ENST00000629346 SSC5DA1L4H1 1573 aa15.53■□□□□ 0.08
CHD2-218ENST00000629346 MED23Q9ULK4 1368 aa15.53■□□□□ 0.08
CHD2-218ENST00000629346 ECM2O94769 699 aaPredicted RBP15.53■□□□□ 0.08
CHD2-218ENST00000629346 MNX1P50219 401 aaPredicted RBP15.53■□□□□ 0.08
CHD2-218ENST00000629346 RIPK4P57078 832 aa15.53■□□□□ 0.08
CHD2-218ENST00000629346 DLGAP5Q15398 846 aa15.53■□□□□ 0.08
CHD2-218ENST00000629346 HDGFL1Q5TGJ6 251 aa15.53■□□□□ 0.08
CHD2-218ENST00000629346 ZBED3Q96IU2 234 aaPredicted RBP15.53■□□□□ 0.08
CHD2-218ENST00000629346 ELP3Q9H9T3 547 aa15.53■□□□□ 0.08
CHD2-218ENST00000629346 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 SOX1O00570 391 aaPredicted RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 PDE8AO60658 829 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 HSP90B1P14625 803 aaKnown RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 IREB2P48200 963 aaKnown RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 TRIM28Q13263 835 aaKnown RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 TAF1CQ15572 869 aaPredicted RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 NBPF12Q5TAG4 269 aaPredicted RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 LRCH3Q96II8 777 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 ARHGAP39Q9C0H5 1083 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 ZFYVE28Q9HCC9 887 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 BABAM1Q9NWV8 329 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
CHD2-218ENST00000629346 PCDHAC2Q9Y5I4 1007 aa15.52■□□□□ 0.08
CHD2-218ENST00000629346 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 USP2O75604 605 aaPredicted RBP15.51■□□□□ 0.07
CHD2-218ENST00000629346 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
CHD2-218ENST00000629346 GTF2IP78347 998 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 MTFR1Q15390 333 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 RIC3Q7Z5B4 369 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 ANKRD13AQ8IZ07 590 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 OPTNQ96CV9 577 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 SHISA4Q96DD7 197 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 COA1Q9GZY4 146 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 PRO3102Q9H379 93 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 DBF4Q9UBU7 674 aaPredicted RBP15.51■□□□□ 0.07
CHD2-218ENST00000629346 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
CHD2-218ENST00000629346 MMP14P50281 582 aa15.5■□□□□ 0.07
CHD2-218ENST00000629346 MS4A4AQ96JQ5 239 aa15.5■□□□□ 0.07
CHD2-218ENST00000629346 MYD88Q99836 296 aa15.5■□□□□ 0.07
CHD2-218ENST00000629346 PNNQ9H307 717 aaKnown RBP15.5■□□□□ 0.07
CHD2-218ENST00000629346 VEZTQ9HBM0 779 aa15.5■□□□□ 0.07
CHD2-218ENST00000629346 COL1A1P02452 1464 aaPredicted RBP15.5■□□□□ 0.07
CHD2-218ENST00000629346 UNCXA6NJT0 531 aa15.49■□□□□ 0.07
CHD2-218ENST00000629346 KIF22Q14807 665 aa15.49■□□□□ 0.07
CHD2-218ENST00000629346 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
CHD2-218ENST00000629346 BRI3BPQ8WY22 251 aa15.49■□□□□ 0.07
CHD2-218ENST00000629346 HTATIP2Q9BUP3 242 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms