RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 GLIS2Q9BZE0 524 aaPredicted RBP13.62□□□□□ -0.23
CHD2-217ENST00000629136 RASSF10A6NK89 507 aa13.61□□□□□ -0.23
CHD2-217ENST00000629136 TAF5LO75529 589 aa13.61□□□□□ -0.23
CHD2-217ENST00000629136 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
CHD2-217ENST00000629136 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
CHD2-217ENST00000629136 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
CHD2-217ENST00000629136 CST9Q5W186 159 aa13.61□□□□□ -0.23
CHD2-217ENST00000629136 AGBL3Q8NEM8 1001 aa13.61□□□□□ -0.23
CHD2-217ENST00000629136 BICC1Q9H694 974 aaKnown RBP13.61□□□□□ -0.23
CHD2-217ENST00000629136 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
CHD2-217ENST00000629136 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
CHD2-217ENST00000629136 ZNF280AP59817 542 aaPredicted RBP13.6□□□□□ -0.23
CHD2-217ENST00000629136 DACT2Q5SW24 774 aa13.6□□□□□ -0.23
CHD2-217ENST00000629136 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
CHD2-217ENST00000629136 ANKRD44Q8N8A2 993 aa13.6□□□□□ -0.23
CHD2-217ENST00000629136 HELBQ8NG08 1087 aaPredicted RBP13.6□□□□□ -0.23
CHD2-217ENST00000629136 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
CHD2-217ENST00000629136 HSPA1AP0DMV8 641 aaKnown RBP13.59□□□□□ -0.23
CHD2-217ENST00000629136 HSPA1BP0DMV9 641 aaKnown RBP13.59□□□□□ -0.23
CHD2-217ENST00000629136 VEGFBP49765 207 aa13.59□□□□□ -0.23
CHD2-217ENST00000629136 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
CHD2-217ENST00000629136 LDHAL6AQ6ZMR3 332 aa13.59□□□□□ -0.23
CHD2-217ENST00000629136 MXD3Q9BW11 206 aa13.59□□□□□ -0.23
CHD2-217ENST00000629136 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
CHD2-217ENST00000629136 ABT1Q9ULW3 272 aaKnown RBP13.59□□□□□ -0.23
CHD2-217ENST00000629136 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
CHD2-217ENST00000629136 KCNJ4P48050 445 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 RARSP54136 660 aaKnown RBP13.58□□□□□ -0.24
CHD2-217ENST00000629136 DEFB115Q30KQ5 88 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 TAF7LQ5H9L4 462 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 RBM26Q5T8P6 1007 aaKnown RBP13.58□□□□□ -0.24
CHD2-217ENST00000629136 STRIP1Q5VSL9 837 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 DLK2Q6UY11 383 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 C15orf52Q6ZUT6 534 aaKnown RBP13.58□□□□□ -0.24
CHD2-217ENST00000629136 CDC37L1Q7L3B6 337 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 PUS3Q9BZE2 481 aaKnown RBP13.58□□□□□ -0.24
CHD2-217ENST00000629136 CNNM1Q9NRU3 951 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 GGA3Q9NZ52 723 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
CHD2-217ENST00000629136 TLL2Q9Y6L7 1015 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 MYO3BQ8WXR4 1341 aa13.58□□□□□ -0.24
CHD2-217ENST00000629136 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
CHD2-217ENST00000629136 CELF2O95319 508 aaKnown RBP13.57□□□□□ -0.24
CHD2-217ENST00000629136 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
CHD2-217ENST00000629136 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
CHD2-217ENST00000629136 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
CHD2-217ENST00000629136 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
CHD2-217ENST00000629136 PAPPA2Q9BXP8 1791 aa13.57□□□□□ -0.24
CHD2-217ENST00000629136 USP17L8P0C7I0 530 aa13.56□□□□□ -0.24
CHD2-217ENST00000629136 KRT26Q7Z3Y9 468 aa13.56□□□□□ -0.24
CHD2-217ENST00000629136 SAPCD2Q86UD0 394 aa13.56□□□□□ -0.24
CHD2-217ENST00000629136 ZNF408Q9H9D4 720 aa13.56□□□□□ -0.24
CHD2-217ENST00000629136 RIPOR2Q9Y4F9 1068 aa13.56□□□□□ -0.24
CHD2-217ENST00000629136 KIF16BQ96L93 1317 aa13.56□□□□□ -0.24
CHD2-217ENST00000629136 PLIN1O60240 522 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 IL1R1P14778 569 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 GTF2IP78347 998 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 HNRNPUQ00839 825 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHD2-217ENST00000629136 LRRC24Q50LG9 513 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
CHD2-217ENST00000629136 TTLL5Q6EMB2 1281 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 KLHDC4Q8TBB5 520 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 DCPSQ96C86 337 aaKnown RBP13.55□□□□□ -0.24
CHD2-217ENST00000629136 WDR33Q9C0J8 1336 aaKnown RBP13.55□□□□□ -0.24
CHD2-217ENST00000629136 LAMB1P07942 1786 aa13.55□□□□□ -0.24
CHD2-217ENST00000629136 UBE4AQ14139 1066 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 SCARF1Q14162 830 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 CYP4F22Q6NT55 531 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 ZNF804AQ7Z570 1209 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 CERS5Q8N5B7 392 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 VGLL2Q8N8G2 317 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 API5Q9BZZ5 524 aaKnown RBP13.54□□□□□ -0.24
CHD2-217ENST00000629136 MROH5Q6ZUA9 1318 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 PITPNM2Q9BZ72 1349 aa13.54□□□□□ -0.24
CHD2-217ENST00000629136 WNT10BO00744 389 aa13.53□□□□□ -0.24
CHD2-217ENST00000629136 RFX5P48382 616 aaPredicted RBP13.53□□□□□ -0.24
CHD2-217ENST00000629136 NBPF9Q3BBW0 867 aa13.53□□□□□ -0.24
CHD2-217ENST00000629136 KIAA0825Q8IV33 1275 aa13.53□□□□□ -0.24
CHD2-217ENST00000629136 CAPNS2Q96L46 248 aa13.53□□□□□ -0.24
CHD2-217ENST00000629136 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
CHD2-217ENST00000629136 FOXN1O15353 648 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 UBTFL1P0CB47 393 aaPredicted RBP13.52□□□□□ -0.25
CHD2-217ENST00000629136 COL13A1Q5TAT6 717 aaPredicted RBP13.52□□□□□ -0.25
CHD2-217ENST00000629136 PAXIP1Q6ZW49 1069 aaPredicted RBP13.52□□□□□ -0.25
CHD2-217ENST00000629136 SULF1Q8IWU6 871 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 OGFOD1Q8N543 542 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 ARHGAP45Q92619 1136 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 CDCA5Q96FF9 252 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 HHIPL1Q96JK4 782 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 SCAF8Q9UPN6 1271 aaKnown RBP13.52□□□□□ -0.25
CHD2-217ENST00000629136 TNNQ9UQP3 1299 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 AKAP11Q9UKA4 1901 aa13.52□□□□□ -0.25
CHD2-217ENST00000629136 BCAR3O75815 825 aa13.51□□□□□ -0.25
CHD2-217ENST00000629136 SASH1O94885 1247 aa13.51□□□□□ -0.25
CHD2-217ENST00000629136 ECE1P42892 770 aa13.51□□□□□ -0.25
CHD2-217ENST00000629136 GYG1P46976 350 aa13.51□□□□□ -0.25
CHD2-217ENST00000629136 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
CHD2-217ENST00000629136 ZBED3Q96IU2 234 aaPredicted RBP13.51□□□□□ -0.25
CHD2-217ENST00000629136 FAM84BQ96KN1 310 aaPredicted RBP13.51□□□□□ -0.25
CHD2-217ENST00000629136 MEIS3Q99687 375 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms